RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 KPNA3O00505 521 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-208ENST00000558827 LRIG2O94898 1065 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ADH1BP00325 375 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 CTSLP07711 333 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 CSRP1P21291 193 aaKnown RBP12.81□□□□□ -0.36
SMAD3-208ENST00000558827 C5AR1P21730 350 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 CD27P26842 260 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 PMLP29590 882 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ADPRHP54922 357 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 FANCCQ00597 558 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 GNA12Q03113 381 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 MTA1Q13330 715 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ARL13BQ3SXY8 428 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ARSIQ5FYB1 569 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 C6orf118Q5T5N4 469 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 SFMBT2Q5VUG0 894 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 DCUN1D2Q6PH85 259 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ZNF571Q7Z3V5 609 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-208ENST00000558827 PIP4P1Q86T03 277 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 SETD3Q86TU7 594 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ZNF354CQ86Y25 554 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 C3orf20Q8ND61 904 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 OR2T34Q8NGX1 318 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ARRDC3Q96B67 414 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 C2orf49Q9BVC5 232 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-208ENST00000558827 HAUS4Q9H6D7 363 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ZNF212Q9UDV6 495 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 SCML1Q9UN30 329 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 CA5BQ9Y2D0 317 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 ANKRD6Q9Y2G4 727 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 DAAM1Q9Y4D1 1078 aa12.81□□□□□ -0.36
SMAD3-208ENST00000558827 A0A1B0GTH6 734 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 TCRBV5S1A1TA0A578 114 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 H0Y8X5 98 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 CREB3O43889 395 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 GJB3O75712 270 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 WNT1P04628 370 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 CEACAM1P13688 526 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 GKP32189 559 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 CHRNA3P32297 505 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 PTPN9P43378 593 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 AFF3P51826 1226 aaKnown RBP12.8□□□□□ -0.36
SMAD3-208ENST00000558827 ARF5P84085 180 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
SMAD3-208ENST00000558827 SFSWAPQ12872 951 aaKnown RBP12.8□□□□□ -0.36
SMAD3-208ENST00000558827 NR1I3Q14994 352 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 TEAD4Q15561 434 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 C22orf39Q6P5X5 142 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 ARCQ7LC44 396 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 STRADAQ7RTN6 431 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 SLFN11Q7Z7L1 901 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 RYBPQ8N488 228 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-208ENST00000558827 PNPLA1Q8N8W4 532 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 DCAF4L2Q8NA75 395 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 OR2A12Q8NGT7 310 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 OR6K2Q8NGY2 324 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 CENPIQ92674 756 aaPredicted RBP12.8□□□□□ -0.36
SMAD3-208ENST00000558827 TM6SF2Q9BZW4 377 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 TRIM7Q9C029 511 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 DNAAF2Q9NVR5 837 aaKnown RBP12.8□□□□□ -0.36
SMAD3-208ENST00000558827 MYO1AQ9UBC5 1043 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 ANGPTL2Q9UKU9 493 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 PPM1HQ9ULR3 514 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 PCDHB9Q9Y5E1 797 aa12.8□□□□□ -0.36
SMAD3-208ENST00000558827 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 A0A1W2PPC4 97 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 ILVBLA1L0T0 632 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 C1QTNF3-AMACRE9PGA6 284 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 DDX3XO00571 662 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMAD3-208ENST00000558827 MCF2LO15068 1137 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 HYAL3O43820 417 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-208ENST00000558827 ZMPSTE24O75844 475 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 FTLP02792 175 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-208ENST00000558827 CCDC172P0C7W6 258 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 C7P10643 843 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 ZNF143P52747 638 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-208ENST00000558827 C21orf59P57076 290 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 KLHL30Q0D2K2 578 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 CCDC157Q569K6 752 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 FAM46CQ5VWP2 391 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 DPY19L3Q6ZPD9 716 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 DSG4Q86SJ6 1040 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 NAXDQ8IW45 347 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 TBC1D31Q96DN5 1066 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 KLC2Q9H0B6 622 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 OSBPL2Q9H1P3 480 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 PCED1AQ9H1Q7 454 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 CAAP1Q9H8G2 361 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 TM7SF3Q9NS93 570 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 PCSK1NQ9UHG2 260 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 ADAMTS1Q9UHI8 967 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 HS3ST2Q9Y278 367 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 BTBD3Q9Y2F9 522 aa12.79□□□□□ -0.36
SMAD3-208ENST00000558827 FARP1Q9Y4F1 1045 aaPredicted RBP12.79□□□□□ -0.36
SMAD3-208ENST00000558827 ANKRD62A6NC57 917 aa12.78□□□□□ -0.36
SMAD3-208ENST00000558827 SLC31A1O15431 190 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms