RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 LGALS13Q9UHV8 139 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 SMG5Q9UPR3 1016 aaKnown RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZFP37Q9Y6Q3 630 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P5-201ENST00000558731 TRIM43BA6NCK2 446 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 AP2A1O95782 977 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 PGAM1P18669 254 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TACR2P21452 398 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 BGNP21810 368 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 FOXN2P32314 431 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 THOC5Q13769 683 aaKnown RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 PPM1JQ5JR12 505 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 LRRC8BQ6P9F7 803 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 RELL1Q8IUW5 271 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 SERBP1Q8NC51 408 aaKnown RBP eCLIP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 MCUQ8NE86 351 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF461Q8TAF7 563 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TRIM43Q96BQ3 446 aaPredicted RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 RMDN1Q96DB5 314 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 MYEOVQ96EZ4 313 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 IFT43Q96FT9 208 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 SGSM3Q96HU1 749 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 SRPK1Q96SB4 655 aaKnown RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 OLA1Q9NTK5 396 aaKnown RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ARHGEF38Q9NXL2 777 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 SENP1Q9P0U3 644 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 SLC39A10Q9ULF5 831 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 H0Y626 953 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 LRG1P02750 347 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 NMBRP28336 390 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 GABRR2P28476 465 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 EPHB3P54753 998 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TRIP4Q15650 581 aaPredicted RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ANO4Q32M45 955 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ANKRD33Q7Z3H0 272 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 DNAJB7Q7Z6W7 309 aaPredicted RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 VSIG1Q86XK7 387 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 SCYL1Q96KG9 808 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 CORO1BQ9BR76 489 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TMEM175Q9BSA9 504 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 VN1R3Q9BXE9 311 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 GLOD4Q9HC38 313 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 KLHL14Q9P2G3 628 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TRHDEQ9UKU6 1024 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TBX21Q9UL17 535 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 COCHO43405 550 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 HDCP19113 662 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 GLRBP48167 497 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 WDR5P61964 334 aaKnown RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 CDH17Q12864 832 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 CTBP1Q13363 440 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 RBM23Q86U06 439 aaKnown RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ARHGAP12Q8IWW6 846 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 EFHBQ8N7U6 833 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TOP1MTQ969P6 601 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 CERS2Q96G23 380 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 TBL1YQ9BQ87 522 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 BRD8Q9H0E9 1235 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ATP13A1Q9HD20 1204 aa11□□□□□ -0.65
CSPG4P5-201ENST00000558731 CPSF2Q9P2I0 782 aaKnown RBP11□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZNF487B1APH4 448 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 TPP1O14773 563 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ANXA9O76027 345 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SUN1O94901 812 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CXCL14O95715 111 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SOD2P04179 222 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 MAGEA11P43364 429 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 DLG2Q15700 870 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CNGA3Q16281 694 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 KCNMB4Q86W47 210 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SPATA6LQ8N4H0 392 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 OR6K2Q8NGY2 324 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ZSCAN18Q8TBC5 510 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 ATP2A3Q93084 1043 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SEMA3CQ99985 751 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 PHTF1Q9UMS5 762 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 AAR2Q9Y312 384 aaKnown RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 TEX28O15482 410 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 MAFKO60675 156 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 VNN2O95498 520 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 RHOCP08134 193 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 WNT3AP56704 352 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 GALNT3Q14435 633 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SMYD5Q6GMV2 418 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 SPATA21Q7Z572 469 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 PTAR1Q7Z6K3 402 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 LDB1Q86U70 411 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 C7orf61Q8IZ16 206 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 FIBCD1Q8N539 461 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 LZTR1Q8N653 840 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CKAP2Q8WWK9 683 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 BADQ92934 168 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 FCRL3Q96P31 734 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 CWH43Q9H720 699 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 IGSF9Q9P2J2 1179 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 MTRRQ9UBK8 725 aa10.99□□□□□ -0.65
CSPG4P5-201ENST00000558731 UXTQ9UBK9 157 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms