RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 BST2Q10589 180 aaKnown RBP11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 DDR2Q16832 855 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 AASDHQ4L235 1098 aaPredicted RBP11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 ATG16L1Q676U5 607 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 MILR1Q7Z6M3 343 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 DSELQ8IZU8 1212 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 C2orf69Q8N8R5 385 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 ZBTB44Q8NCP5 570 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 TNFRSF25Q93038 417 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 RIPOR3Q96MK2 946 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 NELL2Q99435 816 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 MLPHQ9BV36 600 aaPredicted RBP11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 NPAP1Q9NZP6 1156 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 AFG3L2Q9Y4W6 797 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 F8W036 122 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 AXIN1O15169 862 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 SERPINI2O75830 405 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 PGRP06401 933 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 IMPDH1P20839 514 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 COILP38432 576 aaPredicted RBP11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 KCNJ1P48048 391 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 C1QBPQ07021 282 aaKnown RBP11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 AQP6Q13520 282 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 ALG1LQ6GMV1 187 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 BBS12Q6ZW61 710 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 PRSS42Q7Z5A4 293 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 NUDCD3Q8IVD9 361 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF668Q96K58 619 aaPredicted RBP11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 TWNKQ96RR1 684 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 SSU72Q9NP77 194 aaKnown RBP11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 OSGEPQ9NPF4 335 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 SLC17A7Q9P2U7 560 aa11.21□□□□□ -0.61
SEMA4B-204ENST00000558065 PHRF1Q9P1Y6 1649 aaKnown RBP11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 SNAPINO95295 136 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 NTRK1P04629 796 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 KELP23276 732 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 DNAJB1P25685 340 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 TIMM10P62072 90 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 ASIC1P78348 528 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 PPATQ06203 517 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 IKBKEQ14164 716 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 GTDC1Q4AE62 458 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 GADL1Q6ZQY3 521 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 NIPA1Q7RTP0 329 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 LYSMD2Q8IV50 215 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 MCUQ8NE86 351 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 AKAP1Q92667 903 aaKnown RBP eCLIP11.21□□□□□ -0.625e-11■■■■■ 38
SEMA4B-204ENST00000558065 FATE1Q969F0 183 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 UCK1Q9HA47 277 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 SPATA6Q9NWH7 488 aaPredicted RBP11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 SMOXQ9NWM0 555 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 MBD2Q9UBB5 411 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 PSAT1Q9Y617 370 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 AUP1Q9Y679 476 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 CSNK1G3Q9Y6M4 447 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 A2ML1A8K2U0 1454 aa11.21□□□□□ -0.62
SEMA4B-204ENST00000558065 NAB1Q13506 487 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 FUT11Q495W5 492 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 FNDC5Q8NAU1 212 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 PPP1R2P1Q96PQ5 205 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 ZHX3Q9H4I2 956 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 CYP4F11Q9HBI6 524 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 ACP6Q9NPH0 428 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 C20orf96Q9NUD7 363 aaPredicted RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 KBTBD4Q9NVX7 518 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 POLR3BQ9NW08 1133 aaPredicted RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 MTRRQ9UBK8 725 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 ANKRD6Q9Y2G4 727 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 TCAF1Q9Y4C2 921 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 PCDHGA7Q9Y5G6 932 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 DGKBQ9Y6T7 804 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 RGPD1P0DJD0 1748 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 TCRBV7S2A1N4TA0A589 114 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 KRT15P19012 456 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 EEF1DP29692 281 aaKnown RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 UGT2B10P36537 528 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 HTR3AP46098 478 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 ATP2C1P98194 919 aaPredicted RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 BFSP1Q12934 665 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 CCINQ13939 588 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 PPP2R5DQ14738 602 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 SIX1Q15475 284 aaPredicted RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 VN1R5Q7Z5H4 357 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 IRF2BP2Q7Z5L9 587 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 MICU2Q8IYU8 434 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 IFNL2Q8IZJ0 200 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 TCP10LQ8TDR4 215 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 PAWRQ96IZ0 340 aaKnown RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 C9orf72Q96LT7 481 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 DUS2Q9NX74 493 aaKnown RBP11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 RIMBP3CA6NJZ7 1639 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 RIMBP3BA6NNM3 1639 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 LAD1O00515 517 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 CPNE6O95741 557 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 SERPINA6P08185 405 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 POU3F4P49335 361 aa11.2□□□□□ -0.62
SEMA4B-204ENST00000558065 AP1S2P56377 157 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms