RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 PCDH20Q8N6Y1 951 aaKnown RBP14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 NPWQ8N729 165 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 IL17RCQ8NAC3 791 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 RPLP0P6Q8NHW5 317 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 P3H4Q92791 437 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 HMCESQ96FZ2 354 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 PRRX2Q99811 253 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 SLC39A8Q9C0K1 460 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 SP110Q9HB58 689 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 ETNK2Q9NVF9 386 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 IPO11Q9UI26 975 aaKnown RBP14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 ANKRD36A6QL64 1941 aa14.41□□□□□ -0.1
SUPT16H-208ENST00000557652 USP27XA6NNY8 438 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 KCNK3O14649 394 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 ALOX15BO15296 676 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 TIE1P35590 1138 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 PAPOLAP51003 745 aaKnown RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 RENBPP51606 427 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 GNG11P61952 73 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 HNRNPDQ14103 355 aaKnown RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 HNRNPA1L2Q32P51 320 aaKnown RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 FNDC3BQ53EP0 1204 aaKnown RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 C2orf27AQ580R0 203 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 RALGPS1Q5JS13 557 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 EGFLAMQ63HQ2 1017 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 ZNF354CQ86Y25 554 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 SLC35F6Q8N357 371 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 HAUS1Q96CS2 278 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 MRGPRX3Q96LB0 322 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 OLFM3Q96PB7 478 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 POLMQ9NP87 494 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 HOMER3Q9NSC5 361 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 DTLQ9NZJ0 730 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 UBA2Q9UBT2 640 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 TTC7AQ9ULT0 858 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 PACSIN2Q9UNF0 486 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 MTF2Q9Y483 593 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 FARP1Q9Y4F1 1045 aaPredicted RBP14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 STON1Q9Y6Q2 735 aa14.4□□□□□ -0.1
SUPT16H-208ENST00000557652 SPAG17Q6Q759 2223 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 CCDC163A0A0D9SF12 145 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 CTAGE9A4FU28 777 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 DFFAO00273 331 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 MFSD11O43934 449 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 SYNCRIPO60506 623 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 KLF8O95600 359 aaPredicted RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 CES1P23141 567 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 ACVRL1P37023 503 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 MAPK8P45983 427 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 ETF1P62495 437 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 ARF5P84085 180 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 PPIDQ08752 370 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 SFSWAPQ12872 951 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 KLF1Q13351 362 aaPredicted RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 CAMK2GQ13555 558 aaPredicted RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 GRM3Q14832 879 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 CRY1Q16526 586 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 DSG4Q86SJ6 1040 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 ALLCQ8N6M5 410 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 ATP11CQ8NB49 1132 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 TXNDC5Q8NBS9 432 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 MYO19Q96H55 970 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 CELF6Q96J87 481 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 LRIG1Q96JA1 1093 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 NAPGQ99747 312 aaPredicted RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 FAM126AQ9BYI3 521 aaPredicted RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 PDFQ9HBH1 243 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 RBM12Q9NTZ6 932 aaKnown RBP14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 RNF14Q9UBS8 474 aa14.39□□□□□ -0.11
SUPT16H-208ENST00000557652 FANCMQ8IYD8 2048 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 SNAP91O60641 907 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 MAFKO60675 156 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 GSRP00390 522 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 PDGFBP01127 241 aaPredicted RBP14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 SRCP12931 536 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 KRT10P13645 584 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 HOXB2P14652 356 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 AVPR2P30518 371 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 IL12RB1P42701 662 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 RECQLP46063 649 aaPredicted RBP14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 CXCL12P48061 93 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 CSNK1DP48730 415 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 SEC13P55735 322 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 SNRPD1P62314 119 aaKnown RBP14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 GBE1Q04446 702 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 ZBTB16Q05516 673 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 NSUN2Q08J23 767 aaKnown RBP eCLIP14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 ELAVL3Q14576 367 aaKnown RBP14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 DCAF12L1Q5VU92 463 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 KAZNQ674X7 775 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 SLC13A5Q86YT5 568 aaPredicted RBP14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 CYB5D2Q8WUJ1 264 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 VAT1Q99536 393 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 SEPT3Q9UH03 358 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 FBXO4Q9UKT5 387 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 HCN2Q9UL51 889 aa14.38□□□□□ -0.11
SUPT16H-208ENST00000557652 SNX12Q9UMY4 172 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms