RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 IGHV4-34P06331 123 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 SCP2P22307 547 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 PRKCHP24723 683 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 YWHAQP27348 245 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 POLR2BP30876 1174 aaKnown RBP7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 USP8P40818 1118 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 RXRGP48443 463 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 ACOT2P49753 483 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 PSMC1P62191 440 aaKnown RBP7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 ARID5AQ03989 594 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 ZBTB16Q05516 673 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 GOLGA8FQ08AF8 430 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 GOLGA8DPQ0D2H9 430 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 HYAL2Q12891 473 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 ZNF234Q14588 700 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 IGFBP7Q16270 282 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 SLC45A4Q5BKX6 768 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 KIAA0895LQ68EN5 471 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 SHC4Q6S5L8 630 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 HTR3DQ70Z44 454 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 KANSL1Q7Z3B3 1105 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 FAM35AQ86V20 835 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 TMTC1Q8IUR5 882 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 CNGA4Q8IV77 575 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 ARL14Q8N4G2 192 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 EPS8L3Q8TE67 593 aaKnown RBP7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 FBXO32Q969P5 355 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 GRAMD1AQ96CP6 724 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 SCARF2Q96GP6 870 aaPredicted RBP7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 BTBD6Q96KE9 485 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 C8orf48Q96LL4 319 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 SLC46A1Q96NT5 459 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 ERVMER34-1Q9H9K5 563 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 FANCLQ9NW38 375 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 LARSQ9P2J5 1176 aaKnown RBP7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 TJP2Q9UDY2 1190 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 LSM7Q9UK45 103 aaKnown RBP7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 FBXO10Q9UK96 956 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 CDH9Q9ULB4 789 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 AGAP1Q9UPQ3 857 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 SNX9Q9Y5X1 595 aa7.09□□□□□ -1.27
SPTLC2-206ENST00000557566 LRRK1Q38SD2 2015 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 OTOGQ6ZRI0 2925 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 SPENQ96T58 3664 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CTAGE15A4D2H0 777 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 FAM47DPA6NHR8 397 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 VGLL3A8MV65 326 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CDRT15L2A8MXV6 281 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 EIF3CLB5ME19 914 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 TLR4O00206 839 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 BIN1O00499 593 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 SIGLEC6O43699 453 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 SHOX2O60902 331 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 ATP2C2O75185 946 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 IL18RAPO95256 599 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 WNT1P04628 370 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 ITGB3P05106 788 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 GP1BAP07359 652 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CTAGE8P0CG41 777 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 POU3F2P20265 443 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 ELAVL4P26378 380 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 DUSP3P51452 185 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 GTF2A1P52655 376 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 MFAP3P55082 362 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 NCKAP1LP55160 1127 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 NXPH1P58417 271 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 POU5F1Q01860 360 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 ORC2Q13416 577 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CAMK2GQ13555 558 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CASP8Q14790 479 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 EIF4HQ15056 248 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 POSTNQ15063 836 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 GEN1Q17RS7 908 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 FILIP1LQ4L180 1135 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 DNAJC21Q5F1R6 531 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 SNX30Q5VWJ9 437 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 MMS22LQ6ZRQ5 1243 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 ANKS1BQ7Z6G8 1248 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CTAGE6Q86UF2 777 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 SPATS2Q86XZ4 545 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CTAGE4Q8IX94 777 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 C10orf67Q8IYJ2 551 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 NUP93Q8N1F7 819 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 LRRC52Q8N7C0 313 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 MYCBPAPQ8TBZ2 947 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 ZNF564Q8TBZ8 553 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 NUDT8Q8WV74 236 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 KCNN1Q92952 543 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 WBP2Q969T9 261 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 PCED1BQ96HM7 432 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 EIF3CQ99613 913 aaKnown RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 NAPGQ99747 312 aaPredicted RBP7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 NCAPGQ9BPX3 1015 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CIPCQ9C0C6 399 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 ABCG4Q9H172 646 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 SUV39H2Q9H5I1 410 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 CCSER2Q9H7U1 834 aa7.08□□□□□ -1.28
SPTLC2-206ENST00000557566 FBRSQ9HAH7 460 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms