RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 MMS19Q96T76 1030 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 ABHD14AQ9BUJ0 271 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 ADGRE3Q9BY15 652 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 RNF26Q9BY78 433 aaPredicted RBP3.34□□□□□ -1.87
TRAV28-201ENST00000557548 NDST4Q9H3R1 872 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 FBRSL1Q9HCM7 1045 aaKnown RBP3.34□□□□□ -1.87
TRAV28-201ENST00000557548 ARHGEF3Q9NR81 526 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 DUSP22Q9NRW4 184 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 SNTG1Q9NSN8 517 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 ASNSD1Q9NWL6 643 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 ARL15Q9NXU5 204 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 KCTD5Q9NXV2 234 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 DLL3Q9NYJ7 618 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 MRPL15Q9P015 296 aaKnown RBP3.34□□□□□ -1.87
TRAV28-201ENST00000557548 KIAA1456Q9P272 454 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 SUCLA2Q9P2R7 463 aaPredicted RBP3.34□□□□□ -1.87
TRAV28-201ENST00000557548 DKK2Q9UBU2 259 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 MORF4L1Q9UBU8 362 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 FZD4Q9ULV1 537 aa3.34□□□□□ -1.87
TRAV28-201ENST00000557548 ADAMTS20P59510 1910 aa3.34□□□□□ -1.88
TRAV28-201ENST00000557548 TTC34A8MYJ7 566 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 MCIDASD6RGH6 385 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 H0YIZ8 118 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 TP73O15350 636 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 STRNO43815 780 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 PEX1O43933 1283 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 PAGE4O60829 102 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 CBX6O95503 412 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ADAP00813 363 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 RB1P06400 928 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 NPSP0C0P6 89 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 APEHP13798 732 aaKnown RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF8P17098 575 aaPredicted RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 HOXB9P17482 250 aaPredicted RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 LAG3P18627 525 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 SFPQP23246 707 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ACRV1P26436 265 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 POU1F1P28069 291 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 OAS2P29728 719 aaKnown RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 VPS41P49754 854 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 MRPL12P52815 198 aaKnown RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 HMGA2P52926 109 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 KRT83P78385 493 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 PRAMEP78395 509 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 DMWDQ09019 674 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 AIMP1Q12904 312 aaKnown RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 MFSD13AQ14CX5 517 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 PTPRRQ15256 657 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 GSTA3Q16772 222 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 DPCR1Q3MIW9 517 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 SPATS1Q496A3 300 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 HS1BP3Q53T59 392 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 LAIR1Q6GTX8 287 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 SARM1Q6SZW1 724 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 MOB3CQ70IA8 216 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 RTL10Q7L3V2 364 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 MDGA2Q7Z553 956 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 DNAJB7Q7Z6W7 309 aaPredicted RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 FAM160B2Q86V87 743 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ARHGAP12Q8IWW6 846 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF276Q8N554 614 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 SCAIQ8N9R8 606 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 C11orf65Q8NCR3 313 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 DNAAF1Q8NEP3 725 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 FAM110DQ8TAY7 271 aaPredicted RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 EDAQ92838 391 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF764Q96H86 408 aaPredicted RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 KAZALD1Q96I82 304 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 C1orf74Q96LT6 269 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 HS6ST2Q96MM7 605 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 WWC2-AS2Q96NR7 200 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ABHD1Q96SE0 405 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 AIFM2Q9BRQ8 373 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ADPGKQ9BRR6 497 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 SSBP3Q9BWW4 388 aaPredicted RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 APOL6Q9BWW8 343 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 STRA6Q9BX79 667 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 FSD1LQ9BXM9 530 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 CADM1Q9BY67 442 aaKnown RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 GLIS2Q9BZE0 524 aaPredicted RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 KLHL4Q9C0H6 718 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 IKZF4Q9H2S9 585 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 RABEP2Q9H5N1 569 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 RRP7BPQ9NSQ0 103 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 SPATS2LQ9NUQ6 558 aaKnown RBP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAV28-201ENST00000557548 TMEM248Q9NWD8 314 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 BABAM1Q9NWV8 329 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 TAB2Q9NYJ8 693 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 CTNNAL1Q9UBT7 734 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF112Q9UJU3 913 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 FBXO4Q9UKT5 387 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 ADAMTS5Q9UNA0 930 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 PCDHGB5Q9Y5G0 923 aa3.33□□□□□ -1.88
TRAV28-201ENST00000557548 TCRBV7S3A2A0A539 114 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 TMEM200CA6NKL6 621 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 LRRC53A6NM62 1247 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 A8MZ25 164 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 CTDSP2O14595 271 aa3.32□□□□□ -1.88
TRAV28-201ENST00000557548 MPPED1O15442 326 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms