RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CCNJLQ8IV13 435 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 WDR49Q8IV35 697 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 SLITRK4Q8IW52 837 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 KCTD17Q8N5Z5 321 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 ARL10Q8N8L6 244 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 NECAB1Q8N987 351 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 C12orf29Q8N999 325 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 Q8N9G6 341 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 HVCN1Q96D96 273 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 SPAG5Q96R06 1193 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 LRRC61Q9BV99 259 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 SDCBP2Q9H190 292 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 GPN2Q9H9Y4 310 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 STIM2Q9P246 746 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 HMGXB4Q9UGU5 601 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 APOBEC3BQ9UH17 382 aaKnown RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 IPO11Q9UI26 975 aaKnown RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 STOML2Q9UJZ1 356 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 ZFR2Q9UPR6 939 aaKnown RBP9.69□□□□□ -0.86
NEDD1-211ENST00000557454 CEP83Q9Y592 693 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 RNF215Q9Y6U7 377 aa9.69□□□□□ -0.86
NEDD1-211ENST00000557454 ZNF106Q9H2Y7 1883 aaKnown RBP9.68□□□□□ -0.86
NEDD1-211ENST00000557454 YY2O15391 372 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 MAP3K7O43318 606 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 SORBS2O94875 1100 aaKnown RBP9.68□□□□□ -0.86
NEDD1-211ENST00000557454 C4BPAP04003 597 aaKnown RBP9.68□□□□□ -0.86
NEDD1-211ENST00000557454 NUMBP49757 651 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 MYL6P60660 151 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 ECT2LQ008S8 904 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 PTK2BQ14289 1009 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 MCM6Q14566 821 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 ARHGAP44Q17R89 818 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 NADK2Q4G0N4 442 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 ADGRF1Q5T601 910 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
NEDD1-211ENST00000557454 PIP5KL1Q5T9C9 394 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 FAM46CQ5VWP2 391 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 RNF219Q5W0B1 726 aaPredicted RBP9.68□□□□□ -0.86
NEDD1-211ENST00000557454 SPNS3Q6ZMD2 512 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 CBWD2Q8IUF1 395 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 UNC5BQ8IZJ1 945 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 GPD1LQ8N335 351 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 STARD8Q92502 1023 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 ACCSQ96QU6 501 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 STRA6Q9BX79 667 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 SLC29A3Q9BZD2 475 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 CLPBQ9H078 707 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 XYLT2Q9H1B5 865 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 EXOC7Q9UPT5 735 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 NAALADL1Q9UQQ1 740 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 PCDHGA10Q9Y5H3 936 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 KCNMB2Q9Y691 235 aa9.68□□□□□ -0.86
NEDD1-211ENST00000557454 GOLGA6L7A0A1B0GV03 622 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 RAD51BO15315 384 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 CLSTN1O94985 981 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 DLATP10515 647 aaKnown RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 FECHP22830 423 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 PRPHP41219 470 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 RECQLP46063 649 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 COPB1P53618 953 aaKnown RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 TCEA2Q15560 299 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 INPP5JQ15735 1006 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 FSCBQ5H9T9 825 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 EFHC2Q5JST6 749 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 PIK3R6Q5UE93 754 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 XYLT1Q86Y38 959 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 PHACTR4Q8IZ21 702 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 PCDH19Q8TAB3 1148 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 FIBINQ8TAL6 211 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 FAM174AQ8TBP5 190 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 BTN2A2Q8WVV5 523 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 KIAA1143Q96AT1 154 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 FOXP1Q9H334 677 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 SEMA6CQ9H3T2 930 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 PNPLA8Q9NP80 782 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 BLOC1S4Q9NUP1 217 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 TBC1D7Q9P0N9 293 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 MAP10Q9P2G4 905 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 PNMA8BQ9ULN7 279 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 NOL7Q9UMY1 257 aaKnown RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 KCTD3Q9Y597 815 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 B3GALT1Q9Y5Z6 326 aa9.67□□□□□ -0.86
NEDD1-211ENST00000557454 NYNRINQ9P2P1 1898 aaKnown RBP9.67□□□□□ -0.86
NEDD1-211ENST00000557454 LOC101059948A0A1B0GTJ6 334 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 C1QTNF3-AMACRE9PGA6 284 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 KIF20AO95235 890 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 STAU1O95793 577 aaKnown RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 SLFN14P0C7P3 912 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TSHRP16473 764 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 RABIFP47224 123 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 LEPRP48357 1165 aaKnown RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TRPC3Q13507 836 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 CDH18Q13634 790 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 SURF1Q15526 300 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
NEDD1-211ENST00000557454 TMEM259Q4ZIN3 620 aa9.66□□□□□ -0.86
NEDD1-211ENST00000557454 MPP7Q5T2T1 576 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms