RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 IP6K2Q9UHH9 426 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 AP4E1Q9UPM8 1137 aa14.13□□□□□ -0.15
VPS33B-206ENST00000557358 MUC22E2RYF6 1773 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-206ENST00000557358 ATXN2Q99700 1313 aaKnown RBP14.13□□□□□ -0.15
VPS33B-206ENST00000557358 A0A0D9SEW6 157 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 A0A1B0GTW7 788 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 A0A1W2PP55 124 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 FAM47DPA6NHR8 397 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 EEF2KO00418 725 aaKnown RBP14.12□□□□□ -0.15
VPS33B-206ENST00000557358 MCF2LO15068 1137 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 SNAP91O60641 907 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 C7P10643 843 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 HNRNPH3P31942 346 aaKnown RBP14.12□□□□□ -0.15
VPS33B-206ENST00000557358 PCK1P35558 622 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 YBEYP58557 167 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-206ENST00000557358 FOXK2Q01167 660 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 TEAD4Q15561 434 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 HADHQ16836 314 aaKnown RBP14.12□□□□□ -0.15
VPS33B-206ENST00000557358 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 STPG1Q5TH74 334 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 MANEALQ5VSG8 457 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 Q6ZVU0 165 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 SLC41A1Q8IVJ1 513 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 PCDH20Q8N6Y1 951 aaKnown RBP14.12□□□□□ -0.15
VPS33B-206ENST00000557358 OR7D4Q8NG98 312 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 CCDC42Q96M95 316 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 ZDHHC5Q9C0B5 715 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 ZWILCHQ9H900 591 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 DLL3Q9NYJ7 618 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 PCSK1NQ9UHG2 260 aa14.12□□□□□ -0.15
VPS33B-206ENST00000557358 SSU72P8A0A1W2PR75 194 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 BCAT2O15382 392 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 SLC7A4O43246 635 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 FSBPO95073 299 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 H2AFZP0C0S5 128 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 SRCP12931 536 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 ACSL1P33121 698 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 ARL4AP40617 200 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 SSR1P43307 286 aaKnown RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 SERPINH1P50454 418 aaKnown RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 ZNF75DP51815 510 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 IRX4P78413 519 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 RAD51Q06609 339 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 PARP15Q460N3 678 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 RAB6CQ53S08 254 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 PEAR1Q5VY43 1037 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 TCEAL6Q6IPX3 200 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 C22orf39Q6P5X5 142 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 LINGO4Q6UY18 593 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 H2AFVQ71UI9 128 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 ADAT2Q7Z6V5 191 aaKnown RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 RYBPQ8N488 228 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 OR52K2Q8NGK3 314 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 OR2T34Q8NGX1 318 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 OR14C36Q8NHC7 312 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 PIP4K2CQ8TBX8 421 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 FRS2Q8WU20 508 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 CASKIN2Q8WXE0 1202 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 DNASE2BQ8WZ79 361 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 TCEAL3Q969E4 200 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 FAM129BQ96TA1 746 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 PSMB7Q99436 277 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 DNAJC7Q99615 494 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 NUP85Q9BW27 656 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 GTPBP2Q9BX10 602 aaKnown RBP14.11□□□□□ -0.15
VPS33B-206ENST00000557358 RAB6CQ9H0N0 254 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 THAP2Q9H0W7 228 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 KDM4CQ9H3R0 1056 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 CD93Q9NPY3 652 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 ANAPC7Q9UJX3 599 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 NUMA1Q14980 2115 aa14.11□□□□□ -0.15
VPS33B-206ENST00000557358 A0A087X0T9 212 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 LNP1A1A4G5 178 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 ARHGAP42A6NI28 874 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 PATE3B3GLJ2 98 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 AKR1B15C9JRZ8 316 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 FAM72CH0Y354 149 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 H3BRJ5 948 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 KPNA3O00505 521 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 BUB1O43683 1085 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 GDF9O60383 454 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 FAM228BP0C875 321 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 MIPP30301 263 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 CHRNA3P32297 505 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 SNRPD1P62314 119 aaKnown RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 OGDHQ02218 1023 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 SLC18A3Q16572 532 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 SLC45A4Q5BKX6 768 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 PPP6R3Q5H9R7 873 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 FAM72AQ5TYM5 149 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 KIAA0895LQ68EN5 471 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 FAM72DQ6L9T8 149 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 IL27RAQ6UWB1 636 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 NLRP14Q86W24 1093 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 FAM72BQ86X60 149 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 PYROXD2Q8N2H3 581 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 TMIEQ8NEW7 156 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 ANP32BQ92688 251 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms