RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CCDC170Q8IYT3 715 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 UMODL1-AS1Q8N2C9 162 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 GANCQ8TET4 914 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 ZNF419Q96HQ0 510 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-209ENST00000557342 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-209ENST00000557342 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 PACSIN1Q9BY11 444 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 SGK2Q9HBY8 427 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 CD93Q9NPY3 652 aa12.76□□□□□ -0.37
SLIRP-209ENST00000557342 LUC7LQ9NQ29 371 aaKnown RBP12.76□□□□□ -0.37
SLIRP-209ENST00000557342 MID1O15344 667 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PROSCO94903 275 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 IL1BP01584 269 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 RARAP10276 462 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 VAV1P15498 845 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 GOT1P17174 413 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 TGM1P22735 817 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 GLDCP23378 1020 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 IL1R2P27930 398 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 CDC25BP30305 580 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 HOXD12P35452 270 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 ARHGAP25P42331 645 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PI4KAP42356 2102 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 SSR1P43307 286 aaKnown RBP12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PSMD8P48556 350 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 NDST2P52849 883 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 SLC25A11Q02978 314 aaKnown RBP12.75□□□□□ -0.37
SLIRP-209ENST00000557342 LMNB2Q03252 620 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 SPA17Q15506 151 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 SMTNL2Q2TAL5 461 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 WDR45BQ5MNZ6 344 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 DAB2IPQ5VWQ8 1189 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 C22orf39Q6P5X5 142 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 Q6ZVU0 165 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 ARMCX6Q7L4S7 300 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 SDK1Q7Z5N4 2213 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 RABEPKQ7Z6M1 372 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 FAM124AQ86V42 546 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 SYT12Q8IV01 421 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PCDH20Q8N6Y1 951 aaKnown RBP12.75□□□□□ -0.37
SLIRP-209ENST00000557342 C12orf50Q8NA57 414 aaPredicted RBP12.75□□□□□ -0.37
SLIRP-209ENST00000557342 SLC35G2Q8TBE7 412 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 CASKIN2Q8WXE0 1202 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 HSPH1Q92598 858 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PIGKQ92643 395 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 OMDQ99983 421 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 GPR174Q9BXC1 333 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 PARD6AQ9NPB6 346 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 FBXL12Q9NXK8 326 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 FZD4Q9ULV1 537 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 DMDP11532 3685 aa12.75□□□□□ -0.37
SLIRP-209ENST00000557342 A0A1W2PP55 124 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 ARHGAP42A6NI28 874 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 MEI4A8MW99 385 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 GOLGA6L6A8MZA4 724 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 RASA4BC9J798 803 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 K7ERQ8 282 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 KHNYNO15037 678 aaKnown RBP12.74□□□□□ -0.37
SLIRP-209ENST00000557342 RASA4O43374 803 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 SMAD6O43541 496 aaKnown RBP12.74□□□□□ -0.37
SLIRP-209ENST00000557342 BNIP3LO60238 219 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 MTA2O94776 668 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 LCA5LO95447 670 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 SEMA4FO95754 770 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 PRNPP04156 253 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 KRT7P08729 469 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 ERCC2P18074 760 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 MAN1A1P33908 653 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 PTGER3P43115 390 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 MAGEA1P43355 309 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 ARHGAP8P85298 464 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 CCDC15Q0P6D6 951 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 TMTC1Q8IUR5 882 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 SLC41A1Q8IVJ1 513 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 RGL4Q8IZJ4 473 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 LZTR1Q8N653 840 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 DEFB119Q8N690 84 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 OR2A12Q8NGT7 310 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 CEP76Q8TAP6 659 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 RFFLQ8WZ73 363 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
SLIRP-209ENST00000557342 HSPA12BQ96MM6 686 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 NOL6Q9H6R4 1146 aaKnown RBP12.74□□□□□ -0.37
SLIRP-209ENST00000557342 OSGEPQ9NPF4 335 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLIRP-209ENST00000557342 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
SLIRP-209ENST00000557342 IMPACTQ9P2X3 320 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 PILRBQ9UKJ0 227 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 PPM1HQ9ULR3 514 aa12.74□□□□□ -0.37
SLIRP-209ENST00000557342 ZFHX2Q9C0A1 2572 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms