RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336		Q6ZVU0	165 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SLC26A9	Q7LBE3	791 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SLC47A2	Q86VL8	602 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SH2D3C	Q8N5H7	860 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	EID2	Q8N6I1	236 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	MFSD2A	Q8NA29	543 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ZNF397	Q8NF99	534 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CNDP2	Q96KP4	475 aa	Known RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	RPRD1A	Q96P16	312 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	NPY6R	Q99463	290 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ERVMER34-1	Q9H9K5	563 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PLCB1	Q9NQ66	1216 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	GDF3	Q9NR23	364 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TMPRSS4	Q9NRS4	437 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PIGV	Q9NUD9	493 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PCDHGA1	Q9Y5H4	931 aa		11.47	□□□□□ -0.57
HNRNPC-231	ENST00000557336	GTPBP10	A4D1E9	387 aa	Known RBP	11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SLC7A4	O43246	635 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SMAD6	O43541	496 aa	Known RBP	11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SNAP91	O60641	907 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ZNF821	O75541	412 aa	Predicted RBP	11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	DAB1	O75553	588 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	LDOC1	O95751	146 aa	Predicted RBP	11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ITGAV	P06756	1048 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SLC2A3	P11169	496 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SRC	P12931	536 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ABCB4	P21439	1286 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CXCR3	P49682	368 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SLC6A3	Q01959	620 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	NME3	Q13232	169 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	CAMK4	Q16566	473 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	EXOC3L4	Q17RC7	722 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PIP5KL1	Q5T9C9	394 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	OR6B2	Q6IFH4	312 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	FBXL19	Q6PCT2	694 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TMPRSS12	Q86WS5	348 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TRIM69	Q86WT6	500 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	FAM71A	Q8IYT1	594 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SLC25A45	Q8N413	288 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	OR2A12	Q8NGT7	310 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PIP4K2C	Q8TBX8	421 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	VOPP1	Q96AW1	172 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	PRR14	Q9BWN1	585 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	KDM4C	Q9H3R0	1056 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ARHGEF38	Q9NXL2	777 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	ZNF212	Q9UDV6	495 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	SLC12A6	Q9UHW9	1150 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	DNAJC12	Q9UKB3	198 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	HS3ST2	Q9Y278	367 aa		11.46	□□□□□ -0.57
HNRNPC-231	ENST00000557336	TP53BP1	Q12888	1972 aa	Predicted RBP	11.46	□□□□□ -0.58
HNRNPC-231	ENST00000557336	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.46	□□□□□ -0.58
HNRNPC-231	ENST00000557336	FLNB	O75369	2602 aa	Known RBP	11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336		A0A0D9SEW6	157 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	DRGX	A6NNA5	263 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336		M0QYT0	321 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	TRIM38	O00635	465 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	ALOX15B	O15296	676 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	CLDN11	O75508	207 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	GIMD1	P0DJR0	217 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	CDH5	P33151	784 aa	Predicted RBP	11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	NOS2	P35228	1153 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	NNMT	P40261	264 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	GUCA2A	Q02747	115 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	KCNMA1	Q12791	1236 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	ZNF177	Q13360	481 aa	Predicted RBP	11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	BECN1	Q14457	450 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	MIIP	Q5JXC2	388 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	BNIPL	Q7Z465	357 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	IQCH	Q86VS3	1027 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	TMEM145	Q8NBT3	493 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	CHST14	Q8NCH0	376 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	OR8D1	Q8WZ84	308 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	RNF34	Q969K3	372 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	ARRDC3	Q96B67	414 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	PGAP3	Q96FM1	320 aa	Predicted RBP	11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	SIK2	Q9H0K1	926 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	VPS51	Q9UID3	782 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	VPS28	Q9UK41	221 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	TPX2	Q9ULW0	747 aa	Known RBP	11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	DMTF1	Q9Y222	760 aa		11.45	□□□□□ -0.58
HNRNPC-231	ENST00000557336	IGLV3-10	A0A075B6K4	115 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	FAM170A	A1A519	330 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	TLX3	O43711	291 aa	Predicted RBP	11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	RFPL3	O75679	317 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	ZMPSTE24	O75844	475 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	FGFR1OP	O95684	399 aa	Known RBP	11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	C1S	P09871	688 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	PRLR	P16471	622 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	GLDC	P23378	1020 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	GABRB2	P47870	512 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	CDH4	P55283	916 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	OXCT1	P55809	520 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	PTK2	Q05397	1052 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	ZNF284	Q2VY69	593 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	INAVA	Q3KP66	663 aa		11.44	□□□□□ -0.58
HNRNPC-231	ENST00000557336	ACCSL	Q4AC99	568 aa		11.44	□□□□□ -0.58

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