RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 GRIP2Q9C0E4 1043 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SLC28A1O00337 649 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 CST8O60676 142 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 NPTXRO95502 500 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 CDH17Q12864 832 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 LSM12Q3MHD2 195 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF746Q6NUN9 644 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 OFCC1Q8IZS5 231 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 TBCBQ99426 244 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 MARCH7Q9H992 704 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 CHST12Q9NRB3 414 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 FARSAQ9Y285 508 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 IDO1P14902 403 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 IDH2P48735 452 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 MBTD1Q05BQ5 628 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 XKR3Q5GH77 459 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SYCE2Q6PIF2 218 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 C7orf25Q9BPX7 421 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 MTG1Q9BT17 334 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 CDK8P49336 464 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ACADVLP49748 655 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 C11orf24Q96F05 449 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SEPHS2Q99611 448 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 EIF2AK1Q9BQI3 630 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 COA1Q9GZY4 146 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SCNN1DP51172 638 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 HIPK1Q86Z02 1210 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SASH3O75995 380 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 TCF7P36402 384 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 CDK9P50750 372 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF234Q14588 700 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 MREGQ8N565 214 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PCDH19Q8TAB3 1148 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 EAF2Q96CJ1 260 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PLEKHG4BQ96PX9 1271 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 EXO5Q9H790 373 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 UNKLQ9H9P5 680 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PCDH9Q9HC56 1237 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 TRIM38O00635 465 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 KAT7O95251 611 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 HALP42357 657 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 DDX39BQ13838 428 aaKnown RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 IL18Q14116 193 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 TKFCQ3LXA3 575 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 FAM71DQ8N9W8 422 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SLC30A5Q8TAD4 765 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PAFAH2Q99487 392 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 RDH8Q9NYR8 311 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 A0A087WZ62 844 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 KCNK1O00180 336 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 OR56A5P0C7T3 313 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 CACNB1Q02641 598 aaPredicted RBP8.95□□□□□ -0.98
SYNE3-205ENST00000557275 TIGD4Q8IY51 512 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 PLEKHA1Q9HB21 404 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 WDR37Q9Y2I8 494 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 ACTL7BQ9Y614 415 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 SMU1Q2TAY7 513 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 KLHL5Q96PQ7 755 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 TMEM117Q9H0C3 514 aa8.95□□□□□ -0.98
SYNE3-205ENST00000557275 OR5F1O95221 314 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 HOXC12P31275 282 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 CD151P48509 253 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 ATF7IP2Q5U623 682 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 GAS2L3Q86XJ1 694 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 LZTR1Q8N653 840 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 FAM13CQ8NE31 585 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 SGCDQ92629 289 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 S100PBPQ96BU1 408 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 SLC35C2Q9NQQ7 365 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 GGT7Q9UJ14 662 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 C2orf71A6NGG8 1288 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 M0R129 80 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 AXLP30530 894 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 SQLEQ14534 574 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 FCGR1BQ92637 280 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 C16orf58Q96GQ5 468 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 RIOK2Q9BVS4 552 aaKnown RBP8.94□□□□□ -0.98
SYNE3-205ENST00000557275 PAK6Q9NQU5 681 aaPredicted RBP8.94□□□□□ -0.98
SYNE3-205ENST00000557275 TRHDEQ9UKU6 1024 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 PLA2G4CQ9UP65 541 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 C2CD2Q9Y426 696 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 ALG5Q9Y673 324 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 SVILO95425 2214 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 CYP26A1O43174 497 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 ZNF208O43345 1280 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 MAPK8P45983 427 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 RPL10AP62906 217 aaKnown RBP8.94□□□□□ -0.98
SYNE3-205ENST00000557275 USP17L2Q6R6M4 530 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 ITIH5Q86UX2 942 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 TMEM192Q8IY95 271 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 RASGRP4Q8TDF6 673 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 TBATAQ96M53 351 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 ZSWIM1Q9BR11 485 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 ARMCX1Q9P291 453 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 FBXO9Q9UK97 447 aaPredicted RBP8.94□□□□□ -0.98
SYNE3-205ENST00000557275 CLRN2A0PK11 232 aa8.94□□□□□ -0.98
SYNE3-205ENST00000557275 H3BUI4 141 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms