RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CNDP2Q96KP4 475 aaKnown RBP16.28■□□□□ 0.2
TUBB3-213ENST00000557262 CCDC114Q96M63 670 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 STK33Q9BYT3 514 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 PREBQ9HCU5 417 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 SAMSN1Q9NSI8 373 aaKnown RBP16.28■□□□□ 0.2
TUBB3-213ENST00000557262 MPP6Q9NZW5 540 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 VPS51Q9UID3 782 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 GPSM3Q9Y4H4 160 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 SNX10Q9Y5X0 201 aa16.28■□□□□ 0.2
TUBB3-213ENST00000557262 IGLV3-10A0A075B6K4 115 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 A0A0D9SEW6 157 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 FAM149AA5PLN7 773 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 E9PAM4 449 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 K7ERQ8 282 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 RNGTTO60942 597 aaKnown RBP16.27■□□□□ 0.2
TUBB3-213ENST00000557262 LSM8O95777 96 aaKnown RBP16.27■□□□□ 0.2
TUBB3-213ENST00000557262 CTSLP07711 333 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 OR1E1P30953 314 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 FLT3P36888 993 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 CLCN6P51797 869 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 TCP11X2Q5H9J9 407 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 C6orf118Q5T5N4 469 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 ARCQ7LC44 396 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.2
TUBB3-213ENST00000557262 PDCD7Q8N8D1 485 aaKnown RBP16.27■□□□□ 0.2
TUBB3-213ENST00000557262 DCAF4L2Q8NA75 395 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 TMPRSS4Q9NRS4 437 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 TMEM59LQ9UK28 342 aa16.27■□□□□ 0.2
TUBB3-213ENST00000557262 GOLGA4Q13439 2230 aaKnown RBP16.27■□□□□ 0.19
TUBB3-213ENST00000557262 LAMA5O15230 3695 aa16.27■□□□□ 0.19
TUBB3-213ENST00000557262 ILVBLA1L0T0 632 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 GOLGA8SH3BPF8 625 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 CBX4O00257 560 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 KPNA3O00505 521 aaPredicted RBP16.26■□□□□ 0.19
TUBB3-213ENST00000557262 SMAD6O43541 496 aaKnown RBP16.26■□□□□ 0.19
TUBB3-213ENST00000557262 SRGAP2O75044 1071 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 PRNPP04156 253 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 RRM1P23921 792 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
TUBB3-213ENST00000557262 TAS2R38P59533 333 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 SLC20A2Q08357 652 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 CYP4F3Q08477 520 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 DNAJC3Q13217 504 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 C2CD6Q53TS8 623 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 PIP5KL1Q5T9C9 394 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 C19orf48Q6RUI8 117 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 BNIPLQ7Z465 357 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 TFAP2DQ7Z6R9 452 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 CPA5Q8WXQ8 436 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 KLHDC7BQ96G42 594 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 CFAP57Q96MR6 1250 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 NUP62CLQ9H1M0 184 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 DYRK4Q9NR20 520 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 NBEAQ8NFP9 2946 aa16.26■□□□□ 0.19
TUBB3-213ENST00000557262 NYNRINQ9P2P1 1898 aaKnown RBP16.26■□□□□ 0.19
TUBB3-213ENST00000557262 TP53BP1Q12888 1972 aaPredicted RBP16.26■□□□□ 0.19
TUBB3-213ENST00000557262 COL5A1P20908 1838 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-213ENST00000557262 FAM170AA1A519 330 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 RFPL3O75679 317 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 ENDOD1O94919 500 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 MMEP08473 750 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 JUPP14923 745 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 RECQLP46063 649 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-213ENST00000557262 ARTNQ5T4W7 220 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 SFMBT2Q5VUG0 894 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 TRNP1Q6NT89 227 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 RETSATQ6NUM9 610 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 LINGO4Q6UY18 593 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 ZNF783Q6ZMS7 281 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 KANSL1Q7Z3B3 1105 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 ZNF677Q86XU0 584 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 OR7D4Q8NG98 312 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 TSC1Q92574 1164 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 ARRDC3Q96B67 414 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 SPON2Q9BUD6 331 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 ZYG11BQ9C0D3 744 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 RAXQ9Y2V3 346 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 ACACAQ13085 2346 aa16.25■□□□□ 0.19
TUBB3-213ENST00000557262 A0A1W2PQU0 124 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 F8VZ95 297 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 SLC31A1O15431 190 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 ACADVLP49748 655 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 NOMO3P69849 1222 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 ARSIQ5FYB1 569 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 NAA35Q5VZE5 725 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 ERN2Q76MJ5 926 aaKnown RBP16.24■□□□□ 0.19
TUBB3-213ENST00000557262 HORMAD1Q86X24 394 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 FAM131BQ86XD5 332 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 CHST14Q8NCH0 376 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 EPS8L1Q8TE68 723 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 HDAC8Q9BY41 377 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 PPARGC1AQ9UBK2 798 aaKnown RBP16.24■□□□□ 0.19
TUBB3-213ENST00000557262 ZNF212Q9UDV6 495 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 IL36AQ9UHA7 158 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 CA5BQ9Y2D0 317 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 CELSR3Q9NYQ7 3312 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 APC2O95996 2303 aa16.24■□□□□ 0.19
TUBB3-213ENST00000557262 ZNF821O75541 412 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-213ENST00000557262 ZMPSTE24O75844 475 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms