RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 C9orf64Q5T6V5 341 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 ZNF658Q5TYW1 1059 aaPredicted RBP8.96□□□□□ -0.98
VRK1-206ENST00000557222 TCERG1LQ5VWI1 586 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 PMF1Q6P1K2 205 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 RFWD3Q6PCD5 774 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 IQCHQ86VS3 1027 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 CACUL1Q86Y37 369 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 ZNF366Q8N895 744 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 LSM14AQ8ND56 463 aaKnown RBP8.96□□□□□ -0.98
VRK1-206ENST00000557222 WFDC5Q8TCV5 224 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 SAP25Q8TEE9 199 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 GANCQ8TET4 914 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 HNRNPLLQ8WVV9 542 aaKnown RBP8.96□□□□□ -0.98
VRK1-206ENST00000557222 SLC35C1Q96A29 364 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 NXPE2Q96DL1 559 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 SLC39A13Q96H72 371 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 MRGPRX3Q96LB0 322 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 GDF3Q9NR23 364 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.98
VRK1-206ENST00000557222 ASH1LQ9NR48 2969 aaKnown RBP8.95□□□□□ -0.98
VRK1-206ENST00000557222 A0A1W2PR77 199 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 EIF4E1BA6NMX2 242 aaKnown RBP8.95□□□□□ -0.98
VRK1-206ENST00000557222 KCNK3O14649 394 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 MID1O15344 667 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 SLC7A4O43246 635 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 LATO43561 262 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 MAGEC1O60732 1142 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 RFPL3O75679 317 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 SMC2O95347 1197 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 LDOC1O95751 146 aaPredicted RBP8.95□□□□□ -0.98
VRK1-206ENST00000557222 C5AR1P21730 350 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 CD38P28907 300 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 SLC6A4P31645 630 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 SLC8A1P32418 973 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 NNMTP40261 264 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 PPP1R2P41236 205 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 CSKP41240 450 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 PRCPP42785 496 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 FMO5P49326 533 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 ARRB1P49407 418 aaPredicted RBP8.95□□□□□ -0.98
VRK1-206ENST00000557222 ARSDP51689 593 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 OXCT1P55809 520 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 ECT2LQ008S8 904 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 SULT2A1Q06520 285 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 MTA1Q13330 715 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 CDH18Q13634 790 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 RTP5Q14D33 572 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 DCAF17Q5H9S7 520 aaPredicted RBP8.95□□□□□ -0.98
VRK1-206ENST00000557222 MS4A13Q5J8X5 152 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 KCNT1Q5JUK3 1230 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 COX20Q5RI15 118 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 ANKRD40Q6AI12 368 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 NADSYN1Q6IA69 706 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 NCEH1Q6PIU2 408 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 FOXR2Q6PJQ5 311 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 TMEM270Q6UE05 265 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.98
VRK1-206ENST00000557222 MFSD2AQ8NA29 543 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 SPATA20Q8TB22 786 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 TFAP2BQ92481 460 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 FAM131CQ96AQ9 280 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 LRIG1Q96JA1 1093 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 FCRL2Q96LA5 508 aaPredicted RBP8.95□□□□□ -0.98
VRK1-206ENST00000557222 NT5C1BQ96P26 610 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 PPP1R9BQ96SB3 815 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 FAM129BQ96TA1 746 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 OMDQ99983 421 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 NRSN2Q9GZP1 204 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 NEUROG2Q9H2A3 272 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 INTS6Q9UL03 887 aaKnown RBP8.95□□□□□ -0.98
VRK1-206ENST00000557222 ERVW-1Q9UQF0 538 aa8.95□□□□□ -0.98
VRK1-206ENST00000557222 TMEM131Q92545 1883 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 GOLGA6L7A0A1B0GV03 622 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 A0A1W2PP55 124 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 M0QYV0 167 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 TLR4O00206 839 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 RNASEH2AO75792 299 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 LUC7L3O95232 432 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 FYNP06241 537 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 ITGAVP06756 1048 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 NID1P14543 1247 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 JUPP14923 745 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 ABCB4P21439 1286 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 ABCG1P45844 678 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 PLK1P53350 603 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 RPS24P62847 133 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 GCNT1Q02742 428 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 KCNJ12Q14500 433 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 ELAVL3Q14576 367 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 SHBQ15464 509 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 DCAF6Q58WW2 860 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 PITRM1Q5JRX3 1037 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 TTC39BQ5VTQ0 682 aaPredicted RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 RNF219Q5W0B1 726 aaPredicted RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 DHRS13Q6UX07 377 aa8.94□□□□□ -0.98
VRK1-206ENST00000557222 MMAAQ8IVH4 418 aaKnown RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 ELOA2Q8IYF1 753 aaPredicted RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
VRK1-206ENST00000557222 CARNMT1Q8N4J0 409 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms