RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 DNTTP04053 509 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 RALAP11233 206 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 VAV2P52735 878 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 C21orf59P57076 290 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-219ENST00000556951 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
PSEN1-219ENST00000556951 ADAT2Q7Z6V5 191 aaKnown RBP13.12□□□□□ -0.31
PSEN1-219ENST00000556951 UBR7Q8N806 425 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 DCBLD1Q8N8Z6 715 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 EXD3Q8N9H8 876 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 SLC30A5Q8TAD4 765 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 WFDC5Q8TCV5 224 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 NAF1Q96HR8 494 aaKnown RBP13.12□□□□□ -0.31
PSEN1-219ENST00000556951 SYT11Q9BT88 431 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 TSGA10Q9BZW7 698 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-219ENST00000556951 CYP3A43Q9HB55 503 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 STARD5Q9NSY2 213 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 MARCH2Q9P0N8 246 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 PCDHB4Q9Y5E5 795 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 TP53BP1Q12888 1972 aaPredicted RBP13.12□□□□□ -0.31
PSEN1-219ENST00000556951 CSMD1Q96PZ7 3565 aa13.12□□□□□ -0.31
PSEN1-219ENST00000556951 A0A087X0T9 212 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 SLC12A8A0AV02 714 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 DDX3XO00571 662 aaKnown RBP eCLIP13.11□□□□□ -0.317e-8■■□□□ 12.8
PSEN1-219ENST00000556951 CYBBP04839 570 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 FAM228BP0C875 321 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 CYP11B1P15538 503 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 GLDCP23378 1020 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 CD38P28907 300 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 EPHA8P29322 1005 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-219ENST00000556951 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 RXRGP48443 463 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-219ENST00000556951 INCA1Q0VD86 236 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 KIF5AQ12840 1032 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 MPPE1Q53F39 396 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 KIAA1614Q5VZ46 1190 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 MBLAC2Q68D91 279 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 NCEH1Q6PIU2 408 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 ZNF677Q86XU0 584 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
PSEN1-219ENST00000556951 TTC39CQ8N584 583 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 LMLNQ96KR4 655 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 DUSP16Q9BY84 665 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 NEUROG2Q9H2A3 272 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 PABPC3Q9H361 631 aaKnown RBP13.11□□□□□ -0.31
PSEN1-219ENST00000556951 FBRSQ9HAH7 460 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 LRRC4CQ9HCJ2 640 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 ABCB8Q9NUT2 735 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 STOML2Q9UJZ1 356 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 NOCTQ9UK39 431 aaKnown RBP13.11□□□□□ -0.31
PSEN1-219ENST00000556951 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 PLA2G4CQ9UP65 541 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
PSEN1-219ENST00000556951 DNHD1Q96M86 4753 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 PJA2O43164 708 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 DLDP09622 509 aaKnown RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 TNNT1P13805 278 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 CKMT2P17540 419 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 ABCB4P21439 1286 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 SGSHP51688 502 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 NXPH1P58417 271 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 CDR2Q01850 454 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 TLE1Q04724 770 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 ILKQ13418 452 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 RAB41Q5JT25 222 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 CCDC122Q5T0U0 273 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 PPP1R26Q5T8A7 1209 aaPredicted RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 ZNF776Q68DI1 518 aaPredicted RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 ALKBH5Q6P6C2 394 aaKnown RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 BHLHA9Q7RTU4 235 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 NOP9Q86U38 636 aaKnown RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 SLC47A2Q86VL8 602 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 FAM26EQ8N5C1 309 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 CDK5RAP1Q96SZ6 601 aaKnown RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 LZTFL1Q9NQ48 299 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 CISHQ9NSE2 258 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
PSEN1-219ENST00000556951 SPENQ96T58 3664 aaKnown RBP13.1□□□□□ -0.31
PSEN1-219ENST00000556951 FAM47DPA6NHR8 397 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 KRT86O43790 486 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 KIF5CO60282 957 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 PABPC1P11940 636 aaKnown RBP13.09□□□□□ -0.31
PSEN1-219ENST00000556951 CHRNB2P17787 502 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 ACP1P24666 158 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 CD70P32970 193 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 CCR5P51681 352 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 PCBP4P57723 403 aaKnown RBP13.09□□□□□ -0.31
PSEN1-219ENST00000556951 ETF1P62495 437 aaKnown RBP13.09□□□□□ -0.31
PSEN1-219ENST00000556951 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
PSEN1-219ENST00000556951 DNTTIP2Q5QJE6 756 aaKnown RBP13.09□□□□□ -0.31
PSEN1-219ENST00000556951 TMEM270Q6UE05 265 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms