RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SMPD2O60906 423 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 MED24O75448 989 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CBR3O75828 277 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 IDH1O75874 414 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 UBOX5O94941 541 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 PTBP3O95758 552 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 DHFRP00374 187 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 MYCLP12524 364 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 PRG2P13727 222 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 MYL6BP14649 208 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CPA1P15085 419 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 GNSP15586 552 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 PRKCAP17252 672 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 KRT15P19012 456 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 KCNA5P22460 613 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 TCEA1P23193 301 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 PON1P27169 355 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 PDHA2P29803 388 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CASP14P31944 242 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CTNNB1P35222 781 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 RFC1P35251 1148 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 MDH1P40925 334 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 SLC15A1P46059 708 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 OR1G1P47890 313 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 KCNJ5P48544 419 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ARHGDIAP52565 204 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 DCDC1P59894 354 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ACTR1AP61163 376 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 HTD2P86397 168 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 GUCY1A3Q02108 690 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 GCNT1Q02742 428 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CDK5R2Q13319 367 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 DDX39BQ13838 428 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 LPIN1Q14693 890 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 TMEM132BQ14DG7 1078 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ADCK5Q3MIX3 580 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 GTDC1Q4AE62 458 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 LIN9Q5TKA1 542 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 FAM205BPQ63HN1 556 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ZNF530Q6P9A1 599 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 KLHL24Q6TFL4 600 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 NECAB2Q7Z6G3 386 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 STRA8Q7Z7C7 330 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 HPS6Q86YV9 775 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ADGRF2Q8IZF7 708 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ANKRD35Q8N283 1001 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 TCP11L2Q8N4U5 519 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ZNF527Q8NB42 609 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 PCYOX1LQ8NBM8 494 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 MCPH1Q8NEM0 835 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 RIN3Q8TB24 985 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 BAHD1Q8TBE0 780 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 CHPT1Q8WUD6 406 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 PPP1R13LQ8WUF5 828 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 SYN2Q92777 582 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 DDX17Q92841 729 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 PHF21AQ96BD5 680 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 TRIM43Q96BQ3 446 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 TIFAQ96CG3 184 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 MTMR8Q96EF0 704 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 TOE1Q96GM8 510 aaKnown RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 PRICKLE1Q96MT3 831 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 C17orf62Q9BQA9 187 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 C17orf80Q9BSJ5 609 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ZNF717Q9BY31 904 aaPredicted RBP6.31□□□□□ -1.4
TDP1-215ENST00000556498 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 RAB17Q9H0T7 212 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 KLHL1Q9NR64 748 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ACTR10Q9NZ32 417 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CFAP97Q9P2B7 532 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 NARFQ9UHQ1 456 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 GNPTGQ9UJJ9 305 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 CDC23Q9UJX2 597 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 PHTF1Q9UMS5 762 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 SLC12A7Q9Y666 1083 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 REREQ9P2R6 1566 aa6.31□□□□□ -1.4
TDP1-215ENST00000556498 ATP8B3O60423 1300 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 NPHP3Q7Z494 1330 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 LTBP3Q9NS15 1303 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 A0A0U1RQJ8 604 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 hCG_1642624A0A1W2PR95 340 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ZNF233A6NK53 670 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM25AB3EWG3 89 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM25CB3EWG5 89 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FAM25GB3EWG6 89 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PGRMC1O00264 195 aaKnown RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 KPNA4O00629 521 aaPredicted RBP6.3□□□□□ -1.4
TDP1-215ENST00000556498 CLOCKO15516 846 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PTP4A3O75365 173 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 SEMA3DO95025 777 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 RASAL1O95294 804 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 WDPCPO95876 746 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 ARP10275 920 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 RALAP11233 206 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 FGFR2P21802 821 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 GLRA2P23416 452 aa6.3□□□□□ -1.4
TDP1-215ENST00000556498 PTBP1P26599 531 aaKnown RBP eCLIP6.3□□□□□ -1.4
TDP1-215ENST00000556498 ADSSP30520 456 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms