RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 HS3ST4Q9Y661 456 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 ABCB11O95342 1321 aa5.44□□□□□ -1.54
SRP54-211ENST00000556445 CNTNAP1P78357 1384 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 PVALEFA0A1B0GWK0 134 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 CXorf49A8MYA2 514 aaPredicted RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 F8W8V4 182 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 KIF2AO00139 706 aaPredicted RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 PSMA7O14818 248 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 WDR46O15213 610 aaKnown RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 AP5Z1O43299 807 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 RTN3O95197 1032 aaPredicted RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 FGFR1OPO95684 399 aaKnown RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 ITGB1P05556 798 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 CYP3A4P08684 503 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 TPM1P09493 284 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 IL11P20809 199 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 SFPQP23246 707 aaKnown RBP eCLIP5.43□□□□□ -1.54
SRP54-211ENST00000556445 CIITAP33076 1130 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 PTPN7P35236 360 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 POLD2P49005 469 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 PDE6CP51160 858 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 INHBCP55103 352 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 CASP6P55212 293 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 HSD17B7P56937 341 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 RAB1AP62820 205 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 VAMP2P63027 116 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 NHLH2Q02577 135 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 CREMQ03060 361 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 PTK2BQ14289 1009 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 ASIC2Q16515 512 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 Q4G0T1 1027 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 ARMC4Q5T2S8 1044 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 KLHDC7AQ5VTJ3 777 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 LRRC55Q6ZSA7 311 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 USP49Q70CQ1 688 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 CCDC186Q7Z3E2 898 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 GDF7Q7Z4P5 450 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 EPHX4Q8IUS5 362 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 HERC6Q8IVU3 1022 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 FAM114A1Q8IWE2 563 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 PPM1NQ8N819 430 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 SPC24Q8NBT2 197 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 LILRB1Q8NHL6 650 aaPredicted RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 STT3BQ8TCJ2 826 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 TFAP2CQ92754 450 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 N4BP2L2Q92802 583 aaPredicted RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 ZNF566Q969W8 418 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 IQCDQ96DY2 449 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 DHTKD1Q96HY7 919 aaPredicted RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 SPATA17Q96L03 361 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 FAM20AQ96MK3 541 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 MBOAT7Q96N66 472 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 MTMR9Q96QG7 549 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 DCLRE1CQ96SD1 692 aaKnown RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 C7orf25Q9BPX7 421 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 TEX101Q9BY14 249 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 CPVLQ9H3G5 476 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 ZMAT3Q9HA38 289 aaKnown RBP5.43□□□□□ -1.54
SRP54-211ENST00000556445 EXOC1Q9NV70 894 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 TRPM5Q9NZQ8 1165 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 IFNKQ9P0W0 207 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 RWDD2AQ9UIY3 292 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 SLC39A10Q9ULF5 831 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 PCDHA12Q9UN75 941 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 NFE2L3Q9Y4A8 694 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 PCDHAC2Q9Y5I4 1007 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 NR2E3Q9Y5X4 410 aa5.43□□□□□ -1.54
SRP54-211ENST00000556445 MYH7BA7E2Y1 1941 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 GCOM1H8Y6P7 765 aaPredicted RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 INO80B-WBP1J3KQ70 363 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 MEIS2O14770 477 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 FOXN1O15353 648 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 PJA2O43164 708 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 TMEM63AO94886 807 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 POLR2MP0CAP2 368 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 STMN1P16949 149 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 ZNF18P17022 549 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 SLC6A9P48067 706 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 GMPSP49915 693 aaPredicted RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 SLC16A1P53985 500 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 CLRN1P58418 232 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 RNASE9P60153 205 aaKnown RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 ASIC1P78348 528 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 MGAT2Q10469 447 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 SP140Q13342 867 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 CUL4BQ13620 913 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 KARSQ15046 597 aaKnown RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 IL17AQ16552 155 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 TIGD6Q17RP2 521 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 SUPT20HL1Q3ZLR7 823 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 DNTTIP2Q5QJE6 756 aaKnown RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 ZNF362Q5T0B9 420 aaPredicted RBP5.42□□□□□ -1.54
SRP54-211ENST00000556445 FOXR2Q6PJQ5 311 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 FAM47EQ6ZV65 393 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 UNC13DQ70J99 1090 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 LRRC8AQ8IWT6 810 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 PQLC1Q8N2U9 271 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 KIAA1524Q8TCG1 905 aa5.42□□□□□ -1.54
SRP54-211ENST00000556445 CREB3L4Q8TEY5 395 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms