RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 BTBD16Q32M84 506 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 AAGABQ6PD74 315 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 ANKS1BQ7Z6G8 1248 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 TMEM200AQ86VY9 491 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 CCDC25Q86WR0 208 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 CAMK1DQ8IU85 385 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 DCP1BQ8IZD4 617 aaKnown RBP5.53□□□□□ -1.52
PRPF39-209ENST00000556353 SPATA3Q8NHX4 192 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 FAM71BQ8TC56 605 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 NUDCD2Q8WVJ2 157 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 DCLK3Q9C098 648 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 MAGED2Q9UNF1 606 aaPredicted RBP5.53□□□□□ -1.52
PRPF39-209ENST00000556353 SLC4A4Q9Y6R1 1079 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 PTPRTO14522 1441 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 UBR1Q8IWV7 1749 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 CCNB3Q8WWL7 1395 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 MYO5BQ9ULV0 1848 aa5.53□□□□□ -1.52
PRPF39-209ENST00000556353 PLA2R1Q13018 1463 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 LRRC9Q6ZRR7 1453 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 SPATA31D1Q6ZQQ2 1576 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 VWDEQ8N2E2 1590 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM90A18PA6NE21 464 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM90A16PA6NEW6 464 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 GOLGA6L3A6NEY3 463 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM90A9PA6NNJ1 464 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM90A5PA8MXJ8 464 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 ACOT8O14734 319 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 ACAA1P09110 424 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM90A15PP0C7V4 464 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM90A14PP0C7W9 464 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 ARSBP15848 533 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 PPM1AP35813 382 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 RCAN1P53805 252 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 RHAGQ02094 409 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 SPARCL1Q14515 664 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 TRIM60Q495X7 471 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 ATPAF1Q5TC12 328 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-209ENST00000556353 OTUD1Q5VV17 481 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-209ENST00000556353 CAPRIN2Q6IMN6 1127 aaKnown RBP5.52□□□□□ -1.53
PRPF39-209ENST00000556353 MORC1Q86VD1 984 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM217AQ8IXS0 508 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 ENDOVQ8N8Q3 282 aaKnown RBP5.52□□□□□ -1.53
PRPF39-209ENST00000556353 PRR26Q8N8Z3 221 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 STYXQ8WUJ0 223 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM84BQ96KN1 310 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-209ENST00000556353 WDR77Q9BQA1 342 aaPredicted RBP5.52□□□□□ -1.53
PRPF39-209ENST00000556353 ARL15Q9NXU5 204 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 CDC23Q9UJX2 597 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 PKP3Q9Y446 797 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 PTGDR2Q9Y5Y4 395 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 ABCC3O15438 1527 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 FAM135AQ9P2D6 1515 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 MTUS2Q5JR59 1369 aa5.52□□□□□ -1.53
PRPF39-209ENST00000556353 PZPP20742 1482 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 SPAG9O60271 1321 aaKnown RBP5.51□□□□□ -1.53
PRPF39-209ENST00000556353 VPS8Q8N3P4 1428 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 IQGAP1P46940 1657 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 AGAP5A6NIR3 686 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 BECN2A8MW95 431 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 SPRY3O43610 288 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 KLRC2P26717 231 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 PCP4P48539 62 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 POLE2P56282 527 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 KEAP1Q14145 624 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 TBRG1Q3YBR2 411 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 DCAF12L2Q5VW00 463 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 SLC30A9Q6PML9 568 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 DLK2Q6UY11 383 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 CADM3Q8N126 398 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 DPP10Q8N608 796 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 FAM110DQ8TAY7 271 aaPredicted RBP5.51□□□□□ -1.53
PRPF39-209ENST00000556353 PHF21BQ96EK2 531 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 SEZ6LQ9BYH1 1024 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 B3GNT4Q9C0J1 378 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 CATSPERBQ9H7T0 1116 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 ACTR5Q9H9F9 607 aaPredicted RBP5.51□□□□□ -1.53
PRPF39-209ENST00000556353 NLRC4Q9NPP4 1024 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 FZD10Q9ULW2 581 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 ICKQ9UPZ9 632 aa5.51□□□□□ -1.53
PRPF39-209ENST00000556353 PRDM15P57071 1507 aaPredicted RBP5.51□□□□□ -1.53
PRPF39-209ENST00000556353 RTEL1-TNFRSF6BF6WH68 1400 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 PTPN23Q9H3S7 1636 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 TRBV5-7A0A0A0MS05 114 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 A0A1B0GVT2 93 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 EFCAB8A8MWE9 144 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 INAFM1C9JVW0 142 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 FFAR2O15552 330 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 RGS14O43566 566 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 TNFRSF6BO95407 300 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 FGF3P11487 239 aaPredicted RBP5.5□□□□□ -1.53
PRPF39-209ENST00000556353 HOXB9P17482 250 aaPredicted RBP5.5□□□□□ -1.53
PRPF39-209ENST00000556353 HOXD3P31249 432 aaPredicted RBP5.5□□□□□ -1.53
PRPF39-209ENST00000556353 PCYT1AP49585 367 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 OAZ1P54368 228 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 GPS2Q13227 327 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 INO80DQ53TQ3 878 aaPredicted RBP5.5□□□□□ -1.53
PRPF39-209ENST00000556353 KDM1BQ8NB78 822 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 ENGASEQ8NFI3 743 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 NPAS1Q99742 590 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 FRMD8Q9BZ67 464 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms