RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ANGPT4Q9Y264 503 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ATRNO75882 1429 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 UNCXA6NJT0 531 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 MGRN1O60291 552 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SEC22BO75396 215 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 TCN1P20061 433 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ATP4AP20648 1035 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 MIPP30301 263 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 HNMTP50135 292 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 XIAPP98170 497 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SLC34A1Q06495 639 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 STX4Q12846 297 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SQLEQ14534 574 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ACOX1Q15067 660 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 KCNT2Q6UVM3 1135 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 CYP20A1Q6UW02 462 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PEG10Q86TG7 708 aaKnown RBP10.88□□□□□ -0.67
ACTN1-216ENST00000556083 GJD3Q8N144 294 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 SLC2A14Q8TDB8 520 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 IRGQQ8WZA9 623 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 RORBQ92753 470 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 REEP1Q9H902 201 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 TRPS1Q9UHF7 1281 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF112Q9UJU3 913 aa10.88□□□□□ -0.67
ACTN1-216ENST00000556083 PSMD10O75832 226 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 NOS3P29474 1203 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 KLK7P49862 253 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CASP7P55210 303 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 DPYSL3Q14195 570 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 DGUOKQ16854 277 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 PTAR1Q7Z6K3 402 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CROCCP3Q8IVE0 287 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CCDC33Q8N5R6 958 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 KIAA0895Q8NCT3 520 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 P2RX7Q99572 595 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 LHX5Q9H2C1 402 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 DLGAP2Q9P1A6 1054 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 MST1RQ04912 1400 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 KPNA4O00629 521 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 KCNH1O95259 989 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CCDC130P13994 396 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 IRF8Q02556 426 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 NOMO2Q5JPE7 1267 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 FAXCQ5TGI0 409 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 APOBEC3HQ6NTF7 200 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 DHRSXQ8N5I4 330 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 ATG4AQ8WYN0 398 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 OXNAD1Q96HP4 312 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CPB2Q96IY4 423 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 MRPL57Q9BQC6 102 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 LRRC19Q9H756 370 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 HMG20AQ9NP66 347 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 MID1IP1Q9NPA3 183 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 ZNF711Q9Y462 761 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 SMIM35A0A1B0GVV1 85 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 GSAPA4D1B5 854 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 LRRC14BA6NHZ5 514 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 OTCP00480 354 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 VAV1P15498 845 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 LAG3P18627 525 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CDC42P60953 191 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 NDUFA5Q16718 116 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 FNDC3BQ53EP0 1204 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CCDC81Q6ZN84 652 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 PTF1AQ7RTS3 328 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 MON1AQ86VX9 555 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 OR52L1Q8NGH7 329 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 WDR60Q8WVS4 1066 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 DPF3Q92784 378 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CDCA5Q96FF9 252 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 ATXN2Q99700 1313 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 BBIP1A8MTZ0 92 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 RGS5O15539 181 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 RECQL4O94761 1208 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 TRUB2O95900 331 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CTSEP14091 401 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 NFKB1P19838 968 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CYP3A5P20815 502 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 HNRNPH3P31942 346 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 YBEYP58557 167 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 LGALS3BPQ08380 585 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 TRAF2Q12933 501 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 TBX2Q13207 712 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 TRAF7Q6Q0C0 670 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CERS6Q6ZMG9 384 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 SYT12Q8IV01 421 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CCDC103Q8IW40 242 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 FAM71AQ8IYT1 594 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 POMGNT2Q8NAT1 580 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 SPPL2AQ8TCT8 520 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 CENPIQ92674 756 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 DNAJC1Q96KC8 554 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 TEFMQ96QE5 360 aaKnown RBP10.87□□□□□ -0.67
ACTN1-216ENST00000556083 S100A13Q99584 98 aa10.87□□□□□ -0.67
ACTN1-216ENST00000556083 FUCA2Q9BTY2 467 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms