RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ENC1O14682 589 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 MCF2LO15068 1137 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 ATP9BO43861 1147 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 MFSD11O43934 449 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 SNAP91O60641 907 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 PRAMEF11O60813 436 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 ZMPSTE24O75844 475 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 ALDH1A2O94788 518 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 HOXB2P14652 356 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 PRLRP16471 622 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 CCNCP24863 283 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 HSPA9P38646 679 aaKnown RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 GARSP41250 739 aaKnown RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 CXCL12P48061 93 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 SERPINH1P50454 418 aaKnown RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 RENBPP51606 427 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 CCR3P51677 355 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 GBE1Q04446 702 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 MESP2Q0VG99 397 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 XRCC4Q13426 336 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 LLGL1Q15334 1064 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 EMC10Q5UCC4 262 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 TMEM215Q68D42 235 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 CWF19L1Q69YN2 538 aaKnown RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 MAMSTRQ6ZN01 415 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 SYT13Q7L8C5 426 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 DSG4Q86SJ6 1040 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 SLC13A5Q86YT5 568 aaPredicted RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 ARHGAP12Q8IWW6 846 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 C17orf53Q8N3J3 647 aaPredicted RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 SH2D3CQ8N5H7 860 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 CCDC33Q8N5R6 958 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 ALLCQ8N6M5 410 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 PCDH20Q8N6Y1 951 aaKnown RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 TXNDC5Q8NBS9 432 aaKnown RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 RPLP0P6Q8NHW5 317 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 CYB5D2Q8WUJ1 264 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 SORCS1Q8WY21 1168 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 EZH1Q92800 747 aaPredicted RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 HDAC11Q96DB2 347 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 PSMB7Q99436 277 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 FRMD8P1Q9BZ68 369 aaPredicted RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 KLC2Q9H0B6 622 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 HOMER3Q9NSC5 361 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 CACNA2D2Q9NY47 1150 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 DTLQ9NZJ0 730 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 SEPT3Q9UH03 358 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 MMP17Q9ULZ9 603 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 SNX12Q9UMY4 172 aa7.79□□□□□ -1.16
TDP1-214ENST00000556063 MTF2Q9Y483 593 aaPredicted RBP7.79□□□□□ -1.16
TDP1-214ENST00000556063 PRR33A8MZF0 331 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 H7C0C1 242 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 GPR37L1O60883 481 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 RNASEH1O60930 286 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 STK10O94804 968 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 PDGFBP01127 241 aaPredicted RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 ATP1A1P05023 1023 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 EPHX1P07099 455 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 DCNP07585 359 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 SRCP12931 536 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 CXCR5P32302 372 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 IL12RB1P42701 662 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 WASP42768 502 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 PAFAH1B1P43034 410 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 CTSOP43234 321 aaPredicted RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 MAPK8P45983 427 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 ATP5OP48047 213 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 DGKEP52429 567 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 NUBP1P53384 320 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 EIF3EP60228 445 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 RHOAP61586 193 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 SNRPD1P62314 119 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 ARF5P84085 180 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 RAD51Q06609 339 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 AP1B1Q10567 949 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 SFSWAPQ12872 951 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 FZD5Q13467 585 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 ENPP2Q13822 863 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 HNRNPDQ14103 355 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 ZNF235Q14590 738 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 NOMO1Q15155 1222 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 DLG2Q15700 870 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 PTPRNQ16849 979 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 LONRF2Q1L5Z9 754 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 HNRNPA1L2Q32P51 320 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 TMEM31Q5JXX7 168 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 MARC1Q5VT66 337 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 DCAF12L1Q5VU92 463 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 PAPD7Q5XG87 772 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 LINGO4Q6UY18 593 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 CDKL3Q8IVW4 592 aaPredicted RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 SFTPA1Q8IWL2 248 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 PLPP6Q8IY26 295 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 CCDC13Q8IYE1 715 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 IL17RCQ8NAC3 791 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 ACTL9Q8TC94 416 aa7.78□□□□□ -1.16
TDP1-214ENST00000556063 TFB1MQ8WVM0 346 aaKnown RBP7.78□□□□□ -1.16
TDP1-214ENST00000556063 OR8D1Q8WZ84 308 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms