RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DCAF4L2Q8NA75 395 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 WFIKKN2Q8TEU8 576 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 ACDQ96AP0 544 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 RTP4Q96DX8 246 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 RHOXF2Q9BQY4 288 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 PAK5Q9P286 719 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 THEGQ9P2T0 379 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 DEC1Q9P2X7 70 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 ASIC3Q9UHC3 531 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 FBXO10Q9UK96 956 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 TRHDEQ9UKU6 1024 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 OR51B4Q9Y5P0 310 aa11.26□□□□□ -0.61
TMEM260-208ENST00000555905 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 A0A0A0MRY4 1105 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 OTOL1A6NHN0 477 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ARNTLO00327 626 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 TULP3O75386 442 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 HEXIM1O94992 359 aaKnown RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 JCHAINP01591 159 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 IL9P15248 144 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 POLR2EP19388 210 aaKnown RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 PTPN3P26045 913 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 GJA4P35212 333 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ADCY8P40145 1251 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 NUMBP49757 651 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 GDF10P55107 478 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 SLC7A5Q01650 507 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 GUCY2DQ02846 1103 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 SULT2A1Q06520 285 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 WASHC5Q12768 1159 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 HNRNPDQ14103 355 aaKnown RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 RFTN1Q14699 578 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 TRIP13Q15645 432 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ANKRD20A2Q5SQ80 823 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 TMCO4Q5TGY1 634 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ANKRD20A1Q5TYW2 823 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 MARC1Q5VT66 337 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ANKRD20A3Q5VUR7 823 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ETFBKMTQ8IXQ9 262 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 APCDD1Q8J025 514 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 BBS5Q8N3I7 341 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 SLC44A3Q8N4M1 653 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 TTC8Q8TAM2 541 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 CCDC110Q8TBZ0 833 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 MAML1Q92585 1016 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ALG14Q96F25 216 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 LMLNQ96KR4 655 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 SPATA13Q96N96 652 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 ERP44Q9BS26 406 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 TRIM51Q9BSJ1 452 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 TRPV5Q9NQA5 729 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 KLHL8Q9P2G9 620 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 UBA2Q9UBT2 640 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 PRKAG3Q9UGI9 489 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 VPS51Q9UID3 782 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 SLC27A6Q9Y2P4 619 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 V9GYY5 206 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-208ENST00000555905 KIAA1549LQ6ZVL6 1849 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 MIA3Q5JRA6 1907 aa11.25□□□□□ -0.61
TMEM260-208ENST00000555905 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 LOC730098B7Z3J9 87 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 NDC80O14777 642 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 TIMM44O43615 452 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 SNAP91O60641 907 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ZMPSTE24O75844 475 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ATP5BP06576 529 aaKnown RBP11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ASGR2P07307 311 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 CISD3P0C7P0 127 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ZSCAN5DPP0CG00 497 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ETS1P14921 441 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 GLDCP23378 1020 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 RPL22P35268 128 aaKnown RBP11.24□□□□□ -0.61
TMEM260-208ENST00000555905 EIF2DP41214 584 aaKnown RBP11.24□□□□□ -0.61
TMEM260-208ENST00000555905 MMP13P45452 471 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 VPS41P49754 854 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 PFKPQ01813 784 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 KDSRQ06136 332 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 SLC20A2Q08357 652 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 GPS1Q13098 491 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ZBTB17Q13105 803 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ZNF235Q14590 738 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 LBRQ14739 615 aaKnown RBP11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ERCC6LQ2NKX8 1250 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 FUT11Q495W5 492 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 TEX44Q53QW1 395 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 ITPRIPL1Q6GPH6 555 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 LEKR1Q6ZMV7 388 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 PID1Q7Z2X4 250 aa11.24□□□□□ -0.61
TMEM260-208ENST00000555905 KIAA0907Q7Z7F0 614 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-208ENST00000555905 METTL3Q86U44 580 aaKnown RBP11.24□□□□□ -0.61
TMEM260-208ENST00000555905 C12orf40Q86WS4 652 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms