RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 MLXIPLQ9NP71 852 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 ARL8BQ9NVJ2 186 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 TMEM160Q9NX00 188 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 GGA3Q9NZ52 723 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 FLRT1Q9NZU1 646 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 RRP7AQ9Y3A4 280 aaKnown RBP3.72□□□□□ -1.81
SRP54-209ENST00000555746 CEP290O15078 2479 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 MTUS2Q5JR59 1369 aa3.72□□□□□ -1.81
SRP54-209ENST00000555746 TOPAZ1Q8N9V7 1692 aa3.71□□□□□ -1.81
SRP54-209ENST00000555746 ZFYVE9O95405 1425 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 PTPRUQ92729 1446 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 UNC79Q9P2D8 2635 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 VWA3AA6NCI4 1184 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 MANSC4A6NHS7 340 aaPredicted RBP3.71□□□□□ -1.82
SRP54-209ENST00000555746 RRN3P2A6NIE6 340 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 NPIPB13A6NJU9 1138 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 NPIPB5A8MRT5 1133 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 NPIPB4C9JG80 1138 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 MCIDASD6RGH6 385 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 HOXC11O43248 304 aaPredicted RBP3.71□□□□□ -1.82
SRP54-209ENST00000555746 TSPAN3O60637 253 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 USP12O75317 370 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 RBMXL2O75526 392 aaKnown RBP3.71□□□□□ -1.82
SRP54-209ENST00000555746 RNF8O76064 485 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 ALDOCP09972 364 aaKnown RBP3.71□□□□□ -1.82
SRP54-209ENST00000555746 TNNT1P13805 278 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 RPS6KB1P23443 525 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 MCCP23508 829 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 PRPH2P23942 346 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 HSF1Q00613 529 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 B4GALNT1Q00973 533 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 SLC12A1Q13621 1099 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 SEMA3AQ14563 771 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 TMEM119Q4V9L6 283 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 LRRC24Q50LG9 513 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 CBWD5Q5RIA9 395 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 DENND1BQ6P3S1 775 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 ZNF66Q6ZN08 573 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 MMS22LQ6ZRQ5 1243 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 RTL10Q7L3V2 364 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 UBE2Q1Q7Z7E8 422 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 RHPN2Q8IUC4 686 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 TMTC1Q8IUR5 882 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 UEVLDQ8IX04 471 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 GALNT16Q8N428 558 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 DPF1Q92782 380 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 MAP4K1Q92918 833 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 MAELQ96JY0 434 aaKnown RBP3.71□□□□□ -1.82
SRP54-209ENST00000555746 PPP1R10Q96QC0 940 aaKnown RBP3.71□□□□□ -1.82
SRP54-209ENST00000555746 ZNF347Q96SE7 839 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 ABHD14AQ9BUJ0 271 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 TM2D2Q9BX73 214 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 RMI1Q9H9A7 625 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 WASH6PQ9NQA3 447 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 ZNF69Q9UC07 566 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 SLC13A4Q9UKG4 626 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 KIF15Q9NS87 1388 aa3.71□□□□□ -1.82
SRP54-209ENST00000555746 RRBP1Q9P2E9 1410 aaKnown RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 CEP152O94986 1710 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 XRN1Q8IZH2 1706 aaKnown RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 UNC80Q8N2C7 3258 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 EYA2O00167 538 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 INPPL1O15357 1258 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 PLAUP00749 431 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 TUBB4AP04350 444 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 PYGLP06737 847 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 POLBP06746 335 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 AKR1A1P14550 325 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 HOXB9P17482 250 aaPredicted RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 PAX3P23760 479 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 CNTFP26441 200 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 CERS1P27544 350 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 HOXA7P31268 230 aaPredicted RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 ALKBH1Q13686 389 aaKnown RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 SMN1Q16637 294 aaKnown RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 ANXA2RQ3ZCQ2 193 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 INTS11Q5TA45 600 aaKnown RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 ANO7Q6IWH7 933 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 SYNE3Q6ZMZ3 975 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 MDGA2Q7Z553 956 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 SCN4BQ8IWT1 228 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 CNPY4Q8N129 248 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 GPATCH11Q8N954 259 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 LINS1Q8NG48 757 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 OSR1Q8TAX0 266 aaPredicted RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 ZG16BQ96DA0 208 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 MASTLQ96GX5 879 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 C5orf34Q96MH7 638 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 CLPBQ9H078 707 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 OSBPL5Q9H0X9 879 aaPredicted RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 SLITRK6Q9H5Y7 841 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 THAP1Q9NVV9 213 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 CD207Q9UJ71 328 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 DTX4Q9Y2E6 619 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 PKP3Q9Y446 797 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 LRPPRCP42704 1394 aaKnown RBP3.7□□□□□ -1.82
SRP54-209ENST00000555746 MYO5BQ9ULV0 1848 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 PEAK1Q9H792 1746 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 WDR17Q8IZU2 1322 aa3.7□□□□□ -1.82
SRP54-209ENST00000555746 VCANP13611 3396 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms