RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CACUL1Q86Y37 369 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 SLC41A1Q8IVJ1 513 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF366Q8N895 744 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 PIGKQ92643 395 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 CENPIQ92674 756 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF419Q96HQ0 510 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 HSPA12BQ96MM6 686 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 RPRD1AQ96P16 312 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 TKTL2Q9H0I9 626 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 PCED1AQ9H1Q7 454 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 RSPH9Q9H1X1 276 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 WDCPQ9H6R7 721 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 TMEM74BQ9NUR3 256 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 WSB2Q9NYS7 404 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 VANGL2Q9ULK5 521 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ERVW-1Q9UQF0 538 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 TBC1D30Q9Y2I9 924 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 LAMA1P25391 3075 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 IGLV3-10A0A075B6K4 115 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ENC1O14682 589 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ENDOD1O94919 500 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ACADMP11310 421 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 CTNNA2P26232 953 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 MZF1P28698 734 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 MIPP30301 263 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 CTNNA1P35221 906 aaKnown RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 CETN2P41208 172 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 AIF1P55008 147 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 CDH4P55283 916 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 RPS14P62263 151 aaKnown RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 SULT2A1Q06520 285 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ARL13BQ3SXY8 428 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 TRIM61Q5EBN2 209 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ZFYVE27Q5T4F4 411 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ARTNQ5T4W7 220 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF776Q68DI1 518 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 SCYL2Q6P3W7 929 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 SLC23A3Q6PIS1 610 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 RABEPKQ7Z6M1 372 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 C14orf80Q86SX3 495 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 APCDD1Q8J025 514 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 CADM4Q8NFZ8 388 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 OR52K2Q8NGK3 314 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 FOXJ1Q92949 421 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ALG14Q96F25 216 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 TOE1Q96GM8 510 aaKnown RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 HES6Q96HZ4 224 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 C1orf74Q96LT6 269 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 DDX56Q9NY93 547 aaKnown RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 SUN2Q9UH99 717 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 HYOU1Q9Y4L1 999 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 PCDHA3Q9Y5H8 950 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 OR51B4Q9Y5P0 310 aa9.87□□□□□ -0.83
ACTN1-215ENST00000555616 MYO18AQ92614 2054 aaKnown RBP9.87□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 EDDM13A0A1B0GTR0 161 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 MED19A0JLT2 244 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TARSL2A2RTX5 802 aaKnown RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 DRGXA6NNA5 263 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TTC34A8MYJ7 566 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 KCNK3O14649 394 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TM4SF5O14894 197 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 SIN3BO75182 1162 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 NDUFS2O75306 463 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 ATP1A1P05023 1023 aaKnown RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TCP1P17987 556 aaKnown RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 GJC1P36383 396 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 STK19P49842 368 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 DNA2P51530 1060 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 HDAC4P56524 1084 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 RWDD2BP57060 319 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF177Q13360 481 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 ELAVL3Q14576 367 aaKnown RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TTC31Q49AM3 519 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 BOLA3Q53S33 107 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 ALFQ53S48 1182 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 C9orf64Q5T6V5 341 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 SH3PXD2AQ5TCZ1 1133 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 RNF219Q5W0B1 726 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 PAPD7Q5XG87 772 aaKnown RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 IL31Q6EBC2 164 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 FAM131BQ86XD5 332 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 PSTKQ8IV42 348 aaKnown RBP9.86□□□□□ -0.83
ACTN1-215ENST00000555616 DEFB119Q8N690 84 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 CEP76Q8TAP6 659 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TEKT4Q8WW24 435 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 DNASE2BQ8WZ79 361 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 HAPLN3Q96S86 360 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 FEM1AQ9BSK4 669 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TLR10Q9BXR5 811 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 SIK2Q9H0K1 926 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 MTG2Q9H4K7 406 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 CAPN10Q9HC96 672 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 TMPRSS4Q9NRS4 437 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF212Q9UDV6 495 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 SUSD2Q9UGT4 822 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 PCSK1NQ9UHG2 260 aa9.86□□□□□ -0.83
ACTN1-215ENST00000555616 SNX12Q9UMY4 172 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms