RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 ARHGEF2Q92974 986 aaKnown RBP14.03□□□□□ -0.16
SHMT2-219ENST00000555563 BTBD6Q96KE9 485 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 EDEM2Q9BV94 578 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 NUP85Q9BW27 656 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 PACSIN1Q9BY11 444 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 ACE2Q9BYF1 805 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-219ENST00000555563 DEF6Q9H4E7 631 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 DHX35Q9H5Z1 703 aaKnown RBP14.03□□□□□ -0.16
SHMT2-219ENST00000555563 C6orf106Q9H6K1 298 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-219ENST00000555563 FBXL12Q9NXK8 326 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 ANAPC7Q9UJX3 599 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 SCML1Q9UN30 329 aa14.03□□□□□ -0.16
SHMT2-219ENST00000555563 ZNF292O60281 2723 aa14.02□□□□□ -0.16
SHMT2-219ENST00000555563 ALOX15BO15296 676 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 RNASEH2AO75792 299 aaKnown RBP14.02□□□□□ -0.17
SHMT2-219ENST00000555563 SEMA4FO95754 770 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 ADH1BP00325 375 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 CFIP05156 583 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 TCF4P15884 667 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 C5AR1P21730 350 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 SDHBP21912 280 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 IL1R2P27930 398 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-219ENST00000555563 ERMARDQ5T6L9 678 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 DCAF12L1Q5VU92 463 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 RETSATQ6NUM9 610 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 DSG4Q86SJ6 1040 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 GAS2L3Q86XJ1 694 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 CNGA4Q8IV77 575 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 RGL4Q8IZJ4 473 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 KCTD15Q96SI1 283 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-219ENST00000555563 CHP1Q99653 195 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 BTBD1Q9H0C5 482 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 PCED1AQ9H1Q7 454 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 MAGEH1Q9H213 219 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 TNKS2Q9H2K2 1166 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 NOL6Q9H6R4 1146 aaKnown RBP14.02□□□□□ -0.17
SHMT2-219ENST00000555563 CATSPERBQ9H7T0 1116 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 SGK2Q9HBY8 427 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 FSCN3Q9NQT6 498 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 EVLQ9UI08 416 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-219ENST00000555563 SARDHQ9UL12 918 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 NCKAP1Q9Y2A7 1128 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 ACTL7AQ9Y615 435 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 NUMA1Q14980 2115 aa14.02□□□□□ -0.17
SHMT2-219ENST00000555563 METTL12A8MUP2 240 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 WASH4PA8MWX3 477 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 EIF3CLB5ME19 914 aaKnown RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 EEF2KO00418 725 aaKnown RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 MCF2LO15068 1137 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 FGF10O15520 208 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 CD160O95971 181 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 CTSLP07711 333 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 MAOBP27338 520 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 HTR7P34969 479 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 DRD3P35462 400 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 PCK1P35558 622 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 IRX4P78413 519 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 PIGHQ14442 188 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 ACAP1Q15027 740 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 POLD3Q15054 466 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 TSR1Q2NL82 804 aaKnown RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 SMTNL2Q2TAL5 461 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 POM121L1PQ3SYA9 428 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 WDR45BQ5MNZ6 344 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 RFX8Q6ZV50 586 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 PSTKQ8IV42 348 aaKnown RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 HDDC3Q8N4P3 179 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 NIPA2Q8N8Q9 360 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 OR2A12Q8NGT7 310 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 ZNF564Q8TBZ8 553 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 DNASE2BQ8WZ79 361 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 SNX19Q92543 992 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 EIF3CQ99613 913 aaKnown RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 OMDQ99983 421 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 CEP44Q9C0F1 390 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 NEUROG2Q9H2A3 272 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 SPTLC3Q9NUV7 552 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 PPM1HQ9ULR3 514 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 FZD4Q9ULV1 537 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 FCF1Q9Y324 198 aaKnown RBP14.01□□□□□ -0.17
SHMT2-219ENST00000555563 PCDH15Q96QU1 1955 aa14.01□□□□□ -0.17
SHMT2-219ENST00000555563 RASA4BC9J798 803 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 C1QTNF3-AMACRE9PGA6 284 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 PLK4O00444 970 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 SLC30A4O14863 429 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 RASA4O43374 803 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 AKR1B10O60218 316 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 ZNF821O75541 412 aaPredicted RBP14□□□□□ -0.17
SHMT2-219ENST00000555563 GOT1P17174 413 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 LIMK1P53667 647 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 ADPRHP54922 357 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 DUOXA1Q1HG43 343 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 PPP6R3Q5H9R7 873 aaPredicted RBP14□□□□□ -0.17
SHMT2-219ENST00000555563 KCNT1Q5JUK3 1230 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 STPG1Q5TH74 334 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 SLC23A3Q6PIS1 610 aa14□□□□□ -0.17
SHMT2-219ENST00000555563 LEKR1Q6ZMV7 388 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms