RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ZNF844Q08AG5 666 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 MTAPQ13126 283 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF177Q13360 481 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 FZD5Q13467 585 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CCINQ13939 588 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 KRT81Q14533 505 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ATP13A4Q4VNC1 1196 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ERMARDQ5T6L9 678 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 EGFLAMQ63HQ2 1017 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 NUDT18Q6ZVK8 323 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 SYDE1Q6ZW31 735 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CHST9Q7L1S5 443 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ANKS1BQ7Z6G8 1248 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF354CQ86Y25 554 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 PHTF2Q8N3S3 785 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 MAGOHBQ96A72 148 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 NTAN1Q96AB6 310 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 TBC1D31Q96DN5 1066 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 C1orf74Q96LT6 269 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 KCTD15Q96SI1 283 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 TRIM51Q9BSJ1 452 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ZYG11BQ9C0D3 744 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 MUC3BQ9H195 1237 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 HOMER3Q9NSC5 361 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 MTRF1LQ9UGC7 380 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 EEF2KO00418 725 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 PSTPIP1O43586 416 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 KLF8O95600 359 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 RARAP10276 462 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 PABPC1P11940 636 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 GOT1P17174 413 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 POLR2EP19388 210 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 MZF1P28698 734 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 OR1E1P30953 314 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 HOXC13P31276 330 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 PCK1P35558 622 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 COILP38432 576 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 EIF2DP41214 584 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CSKP41240 450 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CTSOP43234 321 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 MARCKSL1P49006 195 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 MTA1Q13330 715 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 SLMAPQ14BN4 828 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 HADHQ16836 314 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 PREPLQ4J6C6 727 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 DNAJC21Q5F1R6 531 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 DGKKQ5KSL6 1271 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 TTC39BQ5VTQ0 682 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 RNF219Q5W0B1 726 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 TMEM215Q68D42 235 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CCDC137Q6PK04 289 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CYP4V2Q6ZWL3 525 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 BMP8AQ7Z5Y6 402 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 HOOK3Q86VS8 718 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 SPATS2Q86XZ4 545 aaKnown RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF683Q8IZ20 524 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 APCDD1Q8J025 514 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF687Q8N1G0 1237 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ALLCQ8N6M5 410 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF513Q8N8E2 541 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 NETO2Q8NC67 525 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 OR52K2Q8NGK3 314 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 FIBINQ8TAL6 211 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 UBLCP1Q8WVY7 318 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 ZBTB9Q96C00 473 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 EPAS1Q99814 870 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 SPON2Q9BUD6 331 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 OSBPL2Q9H1P3 480 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 DPH5Q9H2P9 285 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 CACNA2D2Q9NY47 1150 aa10.1□□□□□ -0.79
PSEN1-213ENST00000555386 FEZ2Q9UHY8 353 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-213ENST00000555386 WASH3PC4AMC7 463 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 CLDN11O75508 207 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 TNFRSF4P43489 277 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 CDH4P55283 916 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 CDH6P55285 790 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 SLC25A11Q02978 314 aaKnown RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 SCAPQ12770 1279 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 GAS6Q14393 721 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 ACAP1Q15027 740 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 SIX1Q15475 284 aaPredicted RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 FUT11Q495W5 492 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 FNDC3BQ53EP0 1204 aaKnown RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 ODF2Q5BJF6 829 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 MPP7Q5T2T1 576 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 MBLAC2Q68D91 279 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 KCTD16Q68DU8 428 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 CXorf57Q6NSI4 855 aaKnown RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 TSSK4Q6SA08 328 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 SRLQ86TD4 932 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 CHPFQ8IZ52 775 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 ZNF366Q8N895 744 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 NIPA2Q8N8Q9 360 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 DTWD2Q8NBA8 298 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 TXNDC5Q8NBS9 432 aaKnown RBP10.09□□□□□ -0.79
PSEN1-213ENST00000555386 KCTD6Q8NC69 237 aa10.09□□□□□ -0.79
PSEN1-213ENST00000555386 OR7D4Q8NG98 312 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms