RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TTC9BQ8N6N2 239 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 IPO11Q9UI26 975 aaKnown RBP16.87■□□□□ 0.29
PCNX1-209ENST00000554879 GABRDO14764 452 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 RAMP2O60895 175 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 PGM3O95394 542 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 SNRPAP09012 282 aaKnown RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 KITP10721 976 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 KLRC2P26717 231 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 PMLP29590 882 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 MAXP61244 160 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 RNF135Q8IUD6 432 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 FRMD8Q9BZ67 464 aaPredicted RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 CCDC68Q9H2F9 335 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 DCLRE1BQ9H816 532 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 MYO18AQ92614 2054 aaKnown RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 HACD1B0YJ81 288 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 FAM72CH0Y354 149 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 CBX4O00257 560 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 NBNO60934 754 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 FAM72AQ5TYM5 149 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 FAM72DQ6L9T8 149 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 DRICH1Q6PGQ1 229 aaPredicted RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 FAM72BQ86X60 149 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 TMEM199Q8N511 208 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 PHF12Q96QT6 1004 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 IL1RAPL1Q9NZN1 696 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 H0Y626 953 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 CASQ2O14958 399 aaPredicted RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 SPAG6O75602 509 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 METTL18O95568 372 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 CLCN2P51788 898 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 NECAB2Q7Z6G3 386 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 CIR1Q86X95 450 aaPredicted RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 DENND1CQ8IV53 801 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 EFHBQ8N7U6 833 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 FAM111AQ96PZ2 611 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 TRAPPC9Q96Q05 1148 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 MRPL17Q9NRX2 175 aaKnown RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 NMRK1Q9NWW6 199 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 SENP1Q9P0U3 644 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 TMCO1Q9UM00 188 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 ALOX15BO15296 676 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 CHADO15335 359 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 PAQR9Q6ZVX9 377 aa16.86■□□□□ 0.29
PCNX1-209ENST00000554879 RTN4RL1Q86UN2 441 aaPredicted RBP16.86■□□□□ 0.29
PCNX1-209ENST00000554879 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.85■□□□□ 0.29
PCNX1-209ENST00000554879 CREB1P16220 341 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 MGAT3Q09327 533 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 FAAP100Q0VG06 881 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 ZNF177Q13360 481 aaPredicted RBP16.85■□□□□ 0.29
PCNX1-209ENST00000554879 KPNB1Q14974 876 aaKnown RBP16.85■□□□□ 0.29
PCNX1-209ENST00000554879 MARC1Q5VT66 337 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 KLC3Q6P597 504 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 EXOC3L1Q86VI1 746 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 CARNMT1Q8N4J0 409 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 TRIML2Q8N7C3 387 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 RMDN2Q96LZ7 410 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 KLHL5Q96PQ7 755 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 C1orf146Q5VVC0 180 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 NCBP2-AS2Q69YL0 99 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 ZMIZ2Q8NF64 920 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 MAML1Q92585 1016 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 MRPS31Q92665 395 aaKnown RBP16.85■□□□□ 0.29
PCNX1-209ENST00000554879 SLCO2A1Q92959 643 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 GALTP07902 379 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 CSF2RAP15509 400 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 GRIA1P42261 906 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 MTTPP55157 894 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 POLD3Q15054 466 aaPredicted RBP16.85■□□□□ 0.29
PCNX1-209ENST00000554879 RFWD3Q6PCD5 774 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 RGS9BPQ6ZS82 235 aa16.85■□□□□ 0.29
PCNX1-209ENST00000554879 LSM7Q9UK45 103 aaKnown RBP16.85■□□□□ 0.29
PCNX1-209ENST00000554879 TCRBV5S1A1TA0A578 114 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 ATP5HO75947 161 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 ANXA9O76027 345 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 CCNB1P14635 433 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 MMEL1Q495T6 779 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 UTS2BQ765I0 119 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 PPHLN1Q8NEY8 458 aaKnown RBP16.84■□□□□ 0.29
PCNX1-209ENST00000554879 EXT2Q93063 718 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 CCDC124Q96CT7 223 aaKnown RBP16.84■□□□□ 0.29
PCNX1-209ENST00000554879 SNX3O60493 162 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 PAMP19021 973 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 TWF1Q12792 350 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 PARP6Q2NL67 630 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 TP53INP2Q8IXH6 220 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 BLOC1S5Q8TDH9 187 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 OLA1Q9NTK5 396 aaKnown RBP16.84■□□□□ 0.29
PCNX1-209ENST00000554879 SMG5Q9UPR3 1016 aaKnown RBP16.84■□□□□ 0.29
PCNX1-209ENST00000554879 DCTN3O75935 186 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 CLTBP09497 229 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 CAP1Q01518 475 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 PKDCCQ504Y2 493 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 LHX8Q68G74 356 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 OTOP3Q7RTS5 596 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 SLC26A11Q86WA9 606 aa16.84■□□□□ 0.29
PCNX1-209ENST00000554879 DIS3LQ8TF46 1054 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms