RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 NELL1Q92832 810 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 HES6Q96HZ4 224 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 KCNH6Q9H252 994 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 MTG2Q9H4K7 406 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 PRSS16Q9NQE7 514 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 EBF1Q9UH73 591 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 CACNA1IQ9P0X4 2223 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 CHD5Q8TDI0 1954 aa21.88■■□□□ 1.09
SDR39U1-208ENST00000554698 EDDM13A0A1B0GTR0 161 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 TCRBV21S2A2A0A5A6 115 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 TARSL2A2RTX5 802 aaKnown RBP21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 SMAD6O43541 496 aaKnown RBP21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 MFSD11O43934 449 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PRAMEF11O60813 436 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 SP9P0CG40 484 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 C7P10643 843 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 DLG2Q15700 870 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 C9orf64Q5T6V5 341 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 ZNF354CQ86Y25 554 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PLD5Q8N7P1 536 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PRSS33Q8NF86 280 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PTPRN2Q92932 1015 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 ALS2CR12Q96Q35 445 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 FAM126AQ9BYI3 521 aaPredicted RBP21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PDFQ9HBH1 243 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PYCARDQ9ULZ3 195 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PACSIN2Q9UNF0 486 aaPredicted RBP21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 DFFAO00273 331 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 DDX3YO15523 660 aaKnown RBP21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 ALDH1A2O94788 518 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 GABRG2P18507 467 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 COPS2P61201 443 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 PPP2R5EQ16537 467 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 TFDP3Q5H9I0 405 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 UBL4BQ8N7F7 174 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 MDGA1Q8NFP4 955 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 TRIM58Q8NG06 486 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 MAK16Q9BXY0 300 aaKnown RBP21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 CEP44Q9C0F1 390 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 FBRSQ9HAH7 460 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 ACTL7AQ9Y615 435 aa21.87■■□□□ 1.09
SDR39U1-208ENST00000554698 MYO18AQ92614 2054 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 hCG_1818297A0A087WSY0 165 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 CCDC163A0A0D9SF12 145 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 J3KR12 359 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 APOL1O14791 398 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 SIN3BO75182 1162 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 ZNF821O75541 412 aaPredicted RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 VAV1P15498 845 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 ZFXP17010 805 aaPredicted RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 COPAP53621 1224 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 GBE1Q04446 702 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 DMWDQ09019 674 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 GALNT2Q10471 571 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 TCF15Q12870 199 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 ACCSLQ4AC99 568 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 INO80DQ53TQ3 878 aaPredicted RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 ANO7Q6IWH7 933 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 C22orf39Q6P5X5 142 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 LEKR1Q6ZMV7 388 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 ARHGAP36Q6ZRI8 547 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 METTL3Q86U44 580 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 LRRC49Q8IUZ0 686 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 CCDC50Q8IVM0 306 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 OR2T3Q8NH03 318 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 CASKIN2Q8WXE0 1202 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 ERLEC1Q96DZ1 483 aa21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 MKRN2Q9H000 416 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 IPO11Q9UI26 975 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.86■■□□□ 1.09
SDR39U1-208ENST00000554698 KRT10P13645 584 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 NDUFV2P19404 249 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 PTPN7P35236 360 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 PXNP49023 591 aaPredicted RBP21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 NRLP54845 237 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 IL10RBQ08334 325 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 SLC10A2Q12908 348 aaPredicted RBP21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 TFDP2Q14188 446 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 MEI1Q5TIA1 1274 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 Q6ZVU0 165 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 RFX6Q8HWS3 928 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 HMGB4Q8WW32 186 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 ISG20Q96AZ6 181 aaKnown RBP21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 MRGPRX1Q96LB2 322 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 TRMT1Q9NXH9 659 aaKnown RBP21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 DTLQ9NZJ0 730 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 EFR3BQ9Y2G0 817 aa21.85■■□□□ 1.09
SDR39U1-208ENST00000554698 MAFKO60675 156 aa21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 PYGMP11217 842 aa21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 GARSP41250 739 aaKnown RBP21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 ADCY2Q08462 1091 aa21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 ELAVL3Q14576 367 aaKnown RBP21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 ATPAF2Q8N5M1 289 aa21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 PCDH20Q8N6Y1 951 aaKnown RBP21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 RSPH9Q9H1X1 276 aaPredicted RBP21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 SP110Q9HB58 689 aa21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 UBA2Q9UBT2 640 aaPredicted RBP21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 FCF1Q9Y324 198 aaKnown RBP21.84■■□□□ 1.09
SDR39U1-208ENST00000554698 MUC6Q6W4X9 2439 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms