RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 OR4Q2P0C623 313 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CTSAP10619 480 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 VDRP11473 427 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CD19P15391 556 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 RPL17P18621 184 aaKnown RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 PCSK1P29120 753 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 GLUD2P49448 558 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 KPNA1P52294 538 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 COL4A4P53420 1690 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 BPIFB4P59827 614 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 IL2P60568 153 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CCZ1BP86790 482 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CCZ1P86791 482 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 FMO1Q01740 532 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 PFKPQ01813 784 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 DLX2Q07687 328 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CAMK1Q14012 370 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 PTPN14Q15678 1187 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 PSMD5Q16401 504 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 ASTE1Q2TB18 679 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CTXN3Q4LDR2 81 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 MDH1BQ5I0G3 518 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 TAF3Q5VWG9 929 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 ARHGAP17Q68EM7 881 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 EP400NLQ6ZTU2 488 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 PAQR9Q6ZVX9 377 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 FMNL3Q8IVF7 1028 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 LRRC8AQ8IWT6 810 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 GPR65Q8IYL9 337 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 THEM5Q8N1Q8 247 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 C12orf29Q8N999 325 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 DTX3Q8N9I9 347 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 POF1BQ8WVV4 589 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF606Q8WXB4 792 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 USP7Q93009 1102 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 TTC1Q99614 292 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CLSTN3Q9BQT9 956 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 YIPF4Q9BSR8 244 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 C11orf84Q9BUA3 381 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 ZCWPW1Q9H0M4 648 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 HAUS4Q9H6D7 363 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 CERS4Q9HA82 394 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 FAM49BQ9NUQ9 324 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 ZNHIT6Q9NWK9 470 aaKnown RBP6.63□□□□□ -1.35
SCFD1-212ENST00000554486 STK39Q9UEW8 545 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 GTF3C4Q9UKN8 822 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 MTUS1Q9ULD2 1270 aa6.63□□□□□ -1.35
SCFD1-212ENST00000554486 MTCL1Q9Y4B5 1905 aaKnown RBP6.62□□□□□ -1.35
SCFD1-212ENST00000554486 PLXNA3P51805 1871 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 A0A1W2PPC1 479 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 H3BNC9 293 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 CXCL14O95715 111 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 IL18BPO95998 194 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 URODP06132 367 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 CCDC172P0C7W6 258 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 CCDC130P13994 396 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 PDE6CP51160 858 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 TSPY1Q01534 308 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 CDR2Q01850 454 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 UBE3AQ05086 875 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 GPM6BQ13491 265 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 MTF1Q14872 753 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 TERF2Q15554 542 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 CNGA2Q16280 664 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 LRIT3Q3SXY7 679 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 TDRD12Q587J7 1177 aaKnown RBP6.62□□□□□ -1.35
SCFD1-212ENST00000554486 PHF19Q5T6S3 580 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 SLC8B1Q6J4K2 584 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF280DQ6N043 979 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 KIAA1841Q6NSI8 718 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 DENND1BQ6P3S1 775 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 LILRA6Q6PI73 481 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 LCLAT1Q6UWP7 414 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 CYP26C1Q6V0L0 522 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 RAD9BQ6WBX8 426 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 ZC3H18Q86VM9 953 aaKnown RBP6.62□□□□□ -1.35
SCFD1-212ENST00000554486 TTC30AQ86WT1 665 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF677Q86XU0 584 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 PALB2Q86YC2 1186 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 FUKQ8N0W3 1084 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 WDTC1Q8N5D0 677 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 TTC9BQ8N6N2 239 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 LINC01356Q8N9X3 169 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 SLC30A5Q8TAD4 765 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 MYCBPAPQ8TBZ2 947 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 SLC2A14Q8TDB8 520 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 FNIP1Q8TF40 1166 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 GDPD5Q8WTR4 605 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 ARNTL2Q8WYA1 636 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 MYLPFQ96A32 169 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 PCED1BQ96HM7 432 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 TNIP3Q96KP6 325 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF830Q96NB3 372 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-212ENST00000554486 PCDHB18PQ96TA0 734 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 BAG1Q99933 345 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-212ENST00000554486 AGPAT1Q99943 283 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 ZNF518BQ9C0D4 1074 aa6.62□□□□□ -1.35
SCFD1-212ENST00000554486 NHEJ1Q9H9Q4 299 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms