RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 ERBB2P04626 1255 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 HNRNPA1P09651 372 aaKnown RBP eCLIP6.98□□□□□ -1.29
KTN1-213ENST00000554306 GABRB2P47870 512 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 NRIP1P48552 1158 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 RPL34P49207 117 aaKnown RBP6.98□□□□□ -1.29
KTN1-213ENST00000554306 CLCN4P51793 760 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 CACNA2D1P54289 1103 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 SLC6A3Q01959 620 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 PTPN20Q4JDL3 420 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 ARHGAP29Q52LW3 1261 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 FAM102AQ5T9C2 384 aaPredicted RBP6.98□□□□□ -1.29
KTN1-213ENST00000554306 SDHAF4Q5VUM1 108 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 DCUN1D2Q6PH85 259 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 MON1BQ7L1V2 547 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 PHLDB2Q86SQ0 1253 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 RHOT2Q8IXI1 618 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 TP53I13Q8NBR0 393 aaPredicted RBP6.98□□□□□ -1.29
KTN1-213ENST00000554306 ZMIZ2Q8NF64 920 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 SLC7A14Q8TBB6 771 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 SLC22A17Q8WUG5 538 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 IRGQQ8WZA9 623 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 CASP10Q92851 521 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 FBXO32Q969P5 355 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 SLITRK1Q96PX8 696 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 ULBP1Q9BZM6 244 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 THAP2Q9H0W7 228 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 PRDM12Q9H4Q4 367 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 MAN1C1Q9NR34 630 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 TLR8Q9NR97 1041 aaKnown RBP6.98□□□□□ -1.29
KTN1-213ENST00000554306 TRMT1Q9NXH9 659 aaKnown RBP6.98□□□□□ -1.29
KTN1-213ENST00000554306 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.98□□□□□ -1.29
KTN1-213ENST00000554306 CTTNBP2NLQ9P2B4 639 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 UVRAGQ9P2Y5 699 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 UXTQ9UBK9 157 aaPredicted RBP6.98□□□□□ -1.29
KTN1-213ENST00000554306 CYTH4Q9UIA0 394 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 PYCARDQ9ULZ3 195 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 NENFQ9UMX5 172 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 MAGED2Q9UNF1 606 aaPredicted RBP6.98□□□□□ -1.29
KTN1-213ENST00000554306 YIPF1Q9Y548 306 aa6.98□□□□□ -1.29
KTN1-213ENST00000554306 DENND4CQ5VZ89 1909 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 A0A0A6YYK5 440 aaPredicted RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 SIGLEC16A6NMB1 481 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 HHLA1C9JL84 531 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 CAPN9O14815 690 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 CEP290O15078 2479 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 PJA2O43164 708 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 PAPSS1O43252 624 aaPredicted RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 NCK2O43639 380 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 NPHS1O60500 1241 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 FGF19O95750 216 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 ZBED1O96006 694 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 CYP1A2P05177 515 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 ASGR2P07307 311 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 RALAP11233 206 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 KRT3P12035 628 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 EPCAMP16422 314 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 PTPN2P17706 415 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 ATF4P18848 351 aaPredicted RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 RRM1P23921 792 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 MSNP26038 577 aaKnown RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 HOXA9P31269 272 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 PPP3CCP48454 512 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 KCNC1P48547 511 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 GPR15P49685 360 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 SLC5A3P53794 718 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 GSCP56915 257 aaPredicted RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 DAOAP59103 153 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 RNASE9P60153 205 aaKnown RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 MRPS5P82675 430 aaKnown RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 TAF10Q12962 218 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 PTP4A2Q12974 167 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 C2CD6Q53TS8 623 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 TCEAL5Q5H9L2 206 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 RAB41Q5JT25 222 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 BTBD8Q5XKL5 378 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 ZNF662Q6ZS27 426 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 FAM183BPQ6ZVS7 135 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 DNAJB7Q7Z6W7 309 aaPredicted RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 ADGRD2Q7Z7M1 963 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 MON1AQ86VX9 555 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 XYLT1Q86Y38 959 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 DNAAF5Q86Y56 855 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 CPNE8Q86YQ8 564 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 CCAR2Q8N163 923 aaKnown RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 SCML4Q8N228 414 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 RNF10Q8N5U6 811 aaKnown RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 TTC9BQ8N6N2 239 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 FAM169BQ8N8A8 192 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 ZNF513Q8N8E2 541 aaPredicted RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 C3orf20Q8ND61 904 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 STKLD1Q8NE28 680 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 BVESQ8NE79 360 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 SCAMP5Q8TAC9 235 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 OLIG1Q8TAK6 271 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 SLC35G2Q8TBE7 412 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 ZNF564Q8TBZ8 553 aaPredicted RBP6.97□□□□□ -1.29
KTN1-213ENST00000554306 FNIP1Q8TF40 1166 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 RFFLQ8WZ73 363 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 FAM149B1Q96BN6 582 aa6.97□□□□□ -1.29
KTN1-213ENST00000554306 GCNAQ96QF7 691 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms