RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SERPINA13PQ6UXR4 307 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 CCDC81Q6ZN84 652 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 PAQR9Q6ZVX9 377 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 KANSL1Q7Z3B3 1105 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 OXR1Q8N573 874 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 B3GALNT2Q8NCR0 500 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 OR5B17Q8NGF7 314 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 HVCN1Q96D96 273 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-224ENST00000554040 STRA6Q9BX79 667 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 CIPCQ9C0C6 399 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 TMEM245Q9H330 911 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 DPEP3Q9H4B8 488 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 ERVMER34-1Q9H9K5 563 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 FBRSQ9HAH7 460 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 ASCL3Q9NQ33 180 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 TLR8Q9NR97 1041 aaKnown RBP7.17□□□□□ -1.26
ATXN3-224ENST00000554040 BLOC1S4Q9NUP1 217 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 INTS13Q9NVM9 706 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 CLEC4EQ9ULY5 219 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 EXOC7Q9UPT5 735 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 ZNF510Q9Y2H8 683 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 MYLKQ15746 1914 aa7.17□□□□□ -1.26
ATXN3-224ENST00000554040 GOLGA8IPA6NC78 632 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 GOLGA8JA6NMD2 632 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 TLR4O00206 839 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 WNT9AO14904 365 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 SLC26A4O43511 780 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 SIGLEC6O43699 453 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 TBCAO75347 108 aaKnown RBP7.16□□□□□ -1.26
ATXN3-224ENST00000554040 CST3P01034 146 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-224ENST00000554040 KLKB1P03952 638 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 MYF5P13349 255 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 ITGB6P18564 788 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 CR2P20023 1033 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 GALCP54803 685 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 NXPH1P58417 271 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 ASIC1P78348 528 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 NFKB2Q00653 900 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 ARID5AQ03989 594 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 KCNA1Q09470 495 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 TTC31Q49AM3 519 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-224ENST00000554040 LRFN4Q6PJG9 635 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 USP30Q70CQ3 517 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 CENPQQ7L2Z9 268 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-224ENST00000554040 GOLGA1Q92805 767 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 GAL3ST3Q96A11 431 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 SLC46A1Q96NT5 459 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 DEPDC7Q96QD5 511 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 ACCSQ96QU6 501 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 FBXO44Q9H4M3 255 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 DMAP1Q9NPF5 467 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-224ENST00000554040 PRSS16Q9NQE7 514 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 AASDHPPTQ9NRN7 309 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 OSER1Q9NX31 292 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 PLA2G4CQ9UP65 541 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 NCKAP1Q9Y2A7 1128 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 ATP8B3O60423 1300 aa7.16□□□□□ -1.26
ATXN3-224ENST00000554040 SPENQ96T58 3664 aaKnown RBP7.16□□□□□ -1.26
ATXN3-224ENST00000554040 MYH11P35749 1972 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 ICE1Q9Y2F5 2266 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 VWA3AA6NCI4 1184 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 FAM47DPA6NHR8 397 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 C10orf142B7Z368 130 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-224ENST00000554040 TRIM38O00635 465 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 MDM4O15151 490 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 OPA1O60313 960 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 STC2O76061 302 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 PRPF6O94906 941 aaKnown RBP7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SLITRK5O94991 958 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SFTPCP11686 197 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 RARGP13631 454 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 RBMS1P29558 406 aaKnown RBP7.15□□□□□ -1.26
ATXN3-224ENST00000554040 INHBCP55103 352 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SURF1Q15526 300 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 FNDC3BQ53EP0 1204 aaKnown RBP7.15□□□□□ -1.26
ATXN3-224ENST00000554040 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.26
ATXN3-224ENST00000554040 NCEH1Q6PIU2 408 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 TRAPPC11Q7Z392 1133 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 ZNF366Q8N895 744 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 ZMIZ2Q8NF64 920 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 CYB5D2Q8WUJ1 264 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 ASB11Q8WXH4 323 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 RAD54LQ92698 747 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 CALML4Q96GE6 196 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SMARCD1Q96GM5 515 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SMOQ99835 787 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SEMA3CQ99985 751 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 CBWD1Q9BRT8 395 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 MED10Q9BTT4 135 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SLC2A11Q9BYW1 496 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 FBXL12Q9NXK8 326 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SUN2Q9UH99 717 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 NUDT5Q9UKK9 219 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SCML1Q9UN30 329 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 SCML2Q9UQR0 700 aa7.15□□□□□ -1.26
ATXN3-224ENST00000554040 TMEM131Q92545 1883 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms