RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 KDELR3O43731 214 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 IL1BP01584 269 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 CYLC1P35663 651 aaPredicted RBP23.76■■□□□ 1.39
NEK9-203ENST00000553945 PTGER3P43115 390 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 SERPINH1P50454 418 aaKnown RBP23.76■■□□□ 1.39
NEK9-203ENST00000553945 CLCN6P51797 869 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 YBEYP58557 167 aaPredicted RBP23.76■■□□□ 1.39
NEK9-203ENST00000553945 MESDQ14696 234 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 SPA17Q15506 151 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 DPYSL2Q16555 572 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 SPDYCQ5MJ68 293 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 LEKR1Q6ZMV7 388 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 CYP2U1Q7Z449 544 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 DSG4Q86SJ6 1040 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 RHOT2Q8IXI1 618 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 KIAA2013Q8IYS2 634 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 UMODL1-AS1Q8N2C9 162 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 HMCESQ96FZ2 354 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 CCDC114Q96M63 670 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 GPR174Q9BXC1 333 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 SCML1Q9UN30 329 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 NCKAP1Q9Y2A7 1128 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 ACTL7AQ9Y615 435 aa23.76■■□□□ 1.39
NEK9-203ENST00000553945 RASA4BC9J798 803 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 RASA4O43374 803 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 LRP3O75074 770 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 ERCC2P18074 760 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 SLC8A1P32418 973 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 GJC1P36383 396 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 MPLP40238 635 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 ARL4AP40617 200 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 HCAR3P49019 387 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 GEMIN4P57678 1058 aaKnown RBP23.75■■□□□ 1.39
NEK9-203ENST00000553945 PARP15Q460N3 678 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 C22orf39Q6P5X5 142 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 TMTC1Q8IUR5 882 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 RFFLQ8WZ73 363 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 TNKS2Q9H2K2 1166 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 FARP1Q9Y4F1 1045 aaPredicted RBP23.75■■□□□ 1.39
NEK9-203ENST00000553945 LAMA1P25391 3075 aa23.75■■□□□ 1.39
NEK9-203ENST00000553945 RALGAPA1Q6GYQ0 2036 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 BCLAF3A2AJT9 711 aaKnown RBP23.74■■□□□ 1.39
NEK9-203ENST00000553945 SOWAHDA6NJG2 315 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 LCA5LO95447 670 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 ADH1BP00325 375 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 FECHP22830 423 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 DNA2P51530 1060 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 SFSWAPQ12872 951 aaKnown RBP23.74■■□□□ 1.39
NEK9-203ENST00000553945 DPYSQ14117 519 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 KRT81Q14533 505 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 LYSMD4Q5XG99 296 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 GPR161Q8N6U8 529 aaKnown RBP23.74■■□□□ 1.39
NEK9-203ENST00000553945 OR2A12Q8NGT7 310 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 PIGKQ92643 395 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 CELF6Q96J87 481 aaKnown RBP23.74■■□□□ 1.39
NEK9-203ENST00000553945 HSPA12BQ96MM6 686 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 OMDQ99983 421 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 CEP44Q9C0F1 390 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 KLC2Q9H0B6 622 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 PCDH18Q9HCL0 1135 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 SEMA4GQ9NTN9 838 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 FBXL12Q9NXK8 326 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 IMPACTQ9P2X3 320 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 FCF1Q9Y324 198 aaKnown RBP23.74■■□□□ 1.39
NEK9-203ENST00000553945 PCDHA13Q9Y5I0 950 aa23.74■■□□□ 1.39
NEK9-203ENST00000553945 TNRC6BQ9UPQ9 1833 aaKnown RBP23.73■■□□□ 1.39
NEK9-203ENST00000553945 A0A1W2PP55 124 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 MCF2LO15068 1137 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 BUB1O43683 1085 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 MTA2O94776 668 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 CD160O95971 181 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 TGM1P22735 817 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 MAN1A1P33908 653 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 RECQLP46063 649 aaPredicted RBP23.73■■□□□ 1.39
NEK9-203ENST00000553945 NDST2P52849 883 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 TAS2R40P59535 323 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 ZNF33AQ06730 810 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 SERINC3Q13530 473 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 USP30Q70CQ3 517 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 POLNQ7Z5Q5 900 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 SLC41A1Q8IVJ1 513 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 PCDH20Q8N6Y1 951 aaKnown RBP23.73■■□□□ 1.39
NEK9-203ENST00000553945 BTBD1Q9H0C5 482 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 LRRC19Q9H756 370 aa23.73■■□□□ 1.39
NEK9-203ENST00000553945 LUC7LQ9NQ29 371 aaKnown RBP23.73■■□□□ 1.39
NEK9-203ENST00000553945 EPN1Q9Y6I3 576 aaPredicted RBP23.73■■□□□ 1.39
NEK9-203ENST00000553945 RIF1Q5UIP0 2472 aaKnown RBP23.73■■□□□ 1.39
NEK9-203ENST00000553945 SDK1Q7Z5N4 2213 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 CXorf51AA0A1B0GTR3 108 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 ZSCAN5CA6NGD5 496 aaPredicted RBP23.72■■□□□ 1.39
NEK9-203ENST00000553945 C1QTNF3-AMACRE9PGA6 284 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 ALOX15BO15296 676 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 RNASEH2AO75792 299 aaKnown RBP23.72■■□□□ 1.39
NEK9-203ENST00000553945 C5AR1P21730 350 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 AMPD1P23109 780 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 ITPKAP23677 461 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 ACSL1P33121 698 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 ARHGAP25P42331 645 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 CDH6P55285 790 aa23.72■■□□□ 1.39
NEK9-203ENST00000553945 CSRP2Q16527 193 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms