RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 SIGLEC16A6NMB1 481 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 PLRG1O43660 514 aaKnown RBP18.12■□□□□ 0.49
FOXN3-204ENST00000553840 MT-CO1P00395 513 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 PRNPP04156 253 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 CD38P28907 300 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 CHRNA3P32297 505 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 RFC1P35251 1148 aaPredicted RBP18.12■□□□□ 0.49
FOXN3-204ENST00000553840 CCT8P50990 548 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 GNA12Q03113 381 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 C1QBPQ07021 282 aaKnown RBP18.12■□□□□ 0.49
FOXN3-204ENST00000553840 CNTN1Q12860 1018 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 INAVAQ3KP66 663 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 CAVIN1Q6NZI2 390 aaKnown RBP18.12■□□□□ 0.49
FOXN3-204ENST00000553840 DNAJC24Q6P3W2 148 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 TMIEQ8NEW7 156 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 RHBDD1Q8TEB9 315 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 CENPIQ92674 756 aaPredicted RBP18.12■□□□□ 0.49
FOXN3-204ENST00000553840 SERAC1Q96JX3 654 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 SLC6A18Q96N87 628 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 CDC6Q99741 560 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 SCNM1Q9BWG6 230 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 OSBPL2Q9H1P3 480 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 PCOLCE2Q9UKZ9 415 aa18.12■□□□□ 0.49
FOXN3-204ENST00000553840 APOBEC2Q9Y235 224 aaKnown RBP18.12■□□□□ 0.49
FOXN3-204ENST00000553840 KPNA3O00505 521 aaPredicted RBP18.11■□□□□ 0.49
FOXN3-204ENST00000553840 RTN2O75298 545 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 TNFAIP3P21580 790 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 RRM1P23921 792 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 CTSKP43235 329 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 MAPKAPK2P49137 400 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 ZNF165P49910 485 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 GEMIN4P57678 1058 aaKnown RBP18.11■□□□□ 0.49
FOXN3-204ENST00000553840 FAM193AP78312 1265 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 WDR59Q6PJI9 974 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 LINGO4Q6UY18 593 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 DBX2Q6ZNG2 339 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 MON1BQ7L1V2 547 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 OR7D4Q8NG98 312 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 NTAN1Q96AB6 310 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 FAM131CQ96AQ9 280 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 PPP1R16AQ96I34 528 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 CEP44Q9C0F1 390 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 RTN4Q9NQC3 1192 aaKnown RBP18.11■□□□□ 0.49
FOXN3-204ENST00000553840 HPCAL4Q9UM19 191 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 WASF3Q9UPY6 502 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 DMTF1Q9Y222 760 aa18.11■□□□□ 0.49
FOXN3-204ENST00000553840 TPRP12270 2363 aaKnown RBP18.1■□□□□ 0.49
FOXN3-204ENST00000553840 CXorf51AA0A1B0GTR3 108 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 K7ERQ8 282 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 LATO43561 262 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 HYAL3O43820 417 aaPredicted RBP18.1■□□□□ 0.49
FOXN3-204ENST00000553840 PCDHGA12O60330 932 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 MAGEC1O60732 1142 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 GJB6O95452 261 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 PLEKP08567 350 aaPredicted RBP18.1■□□□□ 0.49
FOXN3-204ENST00000553840 RHOQP17081 205 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 POM121L1PQ3SYA9 428 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 SETMARQ53H47 684 aaPredicted RBP18.1■□□□□ 0.49
FOXN3-204ENST00000553840 NAPEPLDQ6IQ20 393 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 ACAD10Q6JQN1 1059 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 C22orf39Q6P5X5 142 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 DCUN1D2Q6PH85 259 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 LAYNQ6UX15 382 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 SLFN11Q7Z7L1 901 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 GLRX5Q86SX6 157 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 PCDH20Q8N6Y1 951 aaKnown RBP18.1■□□□□ 0.49
FOXN3-204ENST00000553840 OR2A12Q8NGT7 310 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 TBC1D31Q96DN5 1066 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 EBF2Q9HAK2 575 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 PREBQ9HCU5 417 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 ZNF212Q9UDV6 495 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 IL36AQ9UHA7 158 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 NEUROG3Q9Y4Z2 214 aa18.1■□□□□ 0.49
FOXN3-204ENST00000553840 ACACBO00763 2458 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 H0Y8X5 98 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 PLK4O00444 970 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 KCNK3O14649 394 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 TEX33O43247 280 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 SMAD6O43541 496 aaKnown RBP18.09■□□□□ 0.49
FOXN3-204ENST00000553840 CBFA2T3O75081 653 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 FTH1P19P0C7X4 201 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 SPINK2P20155 84 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 GLDCP23378 1020 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 GRK6P43250 576 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 SERPINH1P50454 418 aaKnown RBP18.09■□□□□ 0.49
FOXN3-204ENST00000553840 DNA2P51530 1060 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 ZNF143P52747 638 aaPredicted RBP18.09■□□□□ 0.49
FOXN3-204ENST00000553840 METAP1P53582 386 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 HDAC4P56524 1084 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 TPM4P67936 248 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 RAB6CQ53S08 254 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 EFHC2Q5JST6 749 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 MANEALQ5VSG8 457 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 AGBL4Q5VU57 503 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 NEK5Q6P3R8 708 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 SCYL2Q6P3W7 929 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 UNQ6494/PRO21346Q6UXR6 183 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 TRIM69Q86WT6 500 aa18.09■□□□□ 0.49
FOXN3-204ENST00000553840 CCDC185Q8N715 623 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms