RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CLDN16Q9Y5I7 305 aa3.59□□□□□ -1.83
VRK1-202ENST00000553683 TCRBV7S3A2A0A539 114 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 OR6C75A6NL08 312 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 H0YGN5 161 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 TNFRSF13BO14836 293 aaPredicted RBP3.58□□□□□ -1.84
VRK1-202ENST00000553683 IRAK2O43187 625 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 SPRY3O43610 288 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 TCEA3O75764 348 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 DDAH2O95865 285 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 T-ENOLP0DO92 83 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 FCGR2AP12318 317 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 ARSAP15289 507 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 CHRNB2P17787 502 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 GNLYP22749 145 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 KLRC2P26717 231 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 ARRB2P32121 409 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 CCKBRP32239 447 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 MLH1P40692 756 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 SKIV2L2P42285 1042 aaKnown RBP3.58□□□□□ -1.84
VRK1-202ENST00000553683 CDKN2AP42771 156 aaKnown RBP3.58□□□□□ -1.84
VRK1-202ENST00000553683 ENTPD1P49961 510 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 HTR6P50406 440 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 CLCNKBP51801 687 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 SELENOVP59797 346 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 DSC1Q08554 894 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 GOLGA8FQ08AF8 430 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 RUNDC3AQ59EK9 446 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 DNTTIP2Q5QJE6 756 aaKnown RBP3.58□□□□□ -1.84
VRK1-202ENST00000553683 CBWD5Q5RIA9 395 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 DCAF12L2Q5VW00 463 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 CRELD2Q6UXH1 353 aaPredicted RBP3.58□□□□□ -1.84
VRK1-202ENST00000553683 RRAGAQ7L523 313 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 SYT13Q7L8C5 426 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 BRSK2Q8IWQ3 736 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 FAM217AQ8IXS0 508 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 TMEM57Q8N5G2 664 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 TMEM217Q8N7C4 229 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 ZMIZ2Q8NF64 920 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 C2CD4CQ8TF44 421 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 GOLGA1Q92805 767 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 KCNJ9Q92806 393 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 ZNF419Q96HQ0 510 aaPredicted RBP3.58□□□□□ -1.84
VRK1-202ENST00000553683 URB1-AS1Q96HZ7 61 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 THOC3Q96J01 351 aaKnown RBP3.58□□□□□ -1.84
VRK1-202ENST00000553683 PLEKHA2Q9HB19 425 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 GRHL1Q9NZI5 618 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 SEL1LQ9UBV2 794 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 RAI2Q9Y5P3 530 aa3.58□□□□□ -1.84
VRK1-202ENST00000553683 CLEC18AA5D8T8 446 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 MS4A18H0YCH9 400 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 VWA5AO00534 786 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 CYP1A2P05177 515 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 DHRS4L1P0CG22 281 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 YWHAQP27348 245 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 AVPR2P30518 371 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 PRKAA2P54646 552 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 Q0VFX4 171 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 CUL4BQ13620 913 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 POSTNQ15063 836 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 C10orf62Q5T681 223 aaPredicted RBP3.57□□□□□ -1.84
VRK1-202ENST00000553683 HEPHL1Q6MZM0 1159 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 GJB7Q6PEY0 223 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 SERPINA11Q86U17 422 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 MOGAT3Q86VF5 341 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 WDR5BQ86VZ2 330 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 VPS52Q8N1B4 723 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 MYCT1Q8N699 235 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 TEX45Q8NA69 505 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 CLEC18CQ8NCF0 446 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 ENGASEQ8NFI3 743 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 CCT6BQ92526 530 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 PHF21BQ96EK2 531 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 MASTLQ96GX5 879 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 HERPUD2Q9BSE4 406 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 FAM167BQ9BTA0 163 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 NPLQ9BXD5 320 aaPredicted RBP3.57□□□□□ -1.84
VRK1-202ENST00000553683 DCLK3Q9C098 648 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 CLPBQ9H078 707 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 HIPK2Q9H2X6 1198 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 NOD2Q9HC29 1040 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 DHDHQ9UQ10 334 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 RIPOR2Q9Y4F9 1068 aa3.57□□□□□ -1.84
VRK1-202ENST00000553683 OR6C68A6NDL8 312 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 STMND1H3BQB6 276 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 IFRD1O00458 451 aaPredicted RBP3.56□□□□□ -1.84
VRK1-202ENST00000553683 SYN3O14994 580 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 STRNO43815 780 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 SOX30O94993 753 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 LCATP04180 440 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 CNPP09543 421 aaKnown RBP3.56□□□□□ -1.84
VRK1-202ENST00000553683 CBSLP0DN79 551 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 CPA1P15085 419 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 CBSP35520 551 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 AVPR1AP37288 418 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 GPR12P47775 334 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 MTNR1AP48039 350 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 PAPOLAP51003 745 aaKnown RBP3.56□□□□□ -1.84
VRK1-202ENST00000553683 PDCLQ13371 301 aa3.56□□□□□ -1.84
VRK1-202ENST00000553683 BYSLQ13895 437 aaKnown RBP3.56□□□□□ -1.84
VRK1-202ENST00000553683 TIGD6Q17RP2 521 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms