RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 MAGOHBQ96A72 148 aaKnown RBP16.48■□□□□ 0.23
ACTN1-209ENST00000553659 DCLK3Q9C098 648 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 ZDHHC5Q9C0B5 715 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 LRRC19Q9H756 370 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 WSB2Q9NYS7 404 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-209ENST00000553659 USP36Q9P275 1121 aaKnown RBP16.48■□□□□ 0.23
ACTN1-209ENST00000553659 AMACRQ9UHK6 382 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 PCDHB9Q9Y5E1 797 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 CACNA1GO43497 2377 aa16.48■□□□□ 0.23
ACTN1-209ENST00000553659 PTPRBP23467 1997 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 OPA1O60313 960 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 HSF2BPO75031 334 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 MYBL2P10244 700 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 KRT3P12035 628 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 PTPN7P35236 360 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 PDCLQ13371 301 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 HLTFQ14527 1009 aaKnown RBP eCLIP16.47■□□□□ 0.23
ACTN1-209ENST00000553659 E2F5Q15329 346 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 HADHQ16836 314 aaKnown RBP16.47■□□□□ 0.23
ACTN1-209ENST00000553659 GEN1Q17RS7 908 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 PTPN20Q4JDL3 420 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 ODF2Q5BJF6 829 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 FYB2Q5VWT5 728 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 ZDHHC17Q8IUH5 632 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 PRELID2Q8N945 189 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 CADM4Q8NFZ8 388 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 TOE1Q96GM8 510 aaKnown RBP16.47■□□□□ 0.23
ACTN1-209ENST00000553659 CAMK1GQ96NX5 476 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 MCEEQ96PE7 176 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 RUFY1Q96T51 708 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 ERP44Q9BS26 406 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 MKRN2Q9H000 416 aaKnown RBP16.47■□□□□ 0.23
ACTN1-209ENST00000553659 HESX1Q9UBX0 185 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 NFU1Q9UMS0 254 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 AKAP13Q12802 2813 aa16.47■□□□□ 0.23
ACTN1-209ENST00000553659 A0A1B0GTW7 788 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 GOLGA6BA6NDN3 693 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 NDC80O14777 642 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 TTI1O43156 1089 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 KRT7P08729 469 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 OAS2P29728 719 aaKnown RBP16.46■□□□□ 0.23
ACTN1-209ENST00000553659 OXTRP30559 389 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 CORO1AP31146 461 aaKnown RBP16.46■□□□□ 0.23
ACTN1-209ENST00000553659 COILP38432 576 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-209ENST00000553659 IL12RB1P42701 662 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 GPD2P43304 727 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 CARSP49589 748 aaKnown RBP16.46■□□□□ 0.23
ACTN1-209ENST00000553659 CCDC137Q6PK04 289 aaKnown RBP16.46■□□□□ 0.23
ACTN1-209ENST00000553659 JAMLQ86YT9 394 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 TMPRSS6Q8IU80 811 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 PIWIL1Q96J94 861 aaKnown RBP16.46■□□□□ 0.23
ACTN1-209ENST00000553659 GPR174Q9BXC1 333 aa16.46■□□□□ 0.23
ACTN1-209ENST00000553659 FRMD8P1Q9BZ68 369 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-209ENST00000553659 ADAMTS20P59510 1910 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 MEI4A8MW99 385 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 SYNCRIPO60506 623 aaKnown RBP16.45■□□□□ 0.22
ACTN1-209ENST00000553659 ECEL1O95672 775 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 CAPNS1P04632 268 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 CYBBP04839 570 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 HMBSP08397 361 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 NCAM1P13591 858 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 SCNN1AP37088 669 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 HSPA9P38646 679 aaKnown RBP16.45■□□□□ 0.22
ACTN1-209ENST00000553659 SSR1P43307 286 aaKnown RBP16.45■□□□□ 0.22
ACTN1-209ENST00000553659 TPMTP51580 245 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 RING1Q06587 406 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 EFEMP1Q12805 493 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 GRIK2Q13002 908 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 XYLT1Q86Y38 959 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 NAXDQ8IW45 347 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 GSPT2Q8IYD1 628 aaKnown RBP16.45■□□□□ 0.22
ACTN1-209ENST00000553659 ARHGAP18Q8N392 663 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 CPXM2Q8N436 756 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 CCHCR1Q8TD31 782 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 ADAMTS14Q8WXS8 1223 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 SIPA1Q96FS4 1042 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 ELOVL2Q9NXB9 296 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 TSPAN16Q9UKR8 245 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 AGO1Q9UL18 857 aaKnown RBP16.45■□□□□ 0.22
ACTN1-209ENST00000553659 EFR3BQ9Y2G0 817 aa16.45■□□□□ 0.22
ACTN1-209ENST00000553659 FAM170AA1A519 330 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 METTL12A8MUP2 240 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 TAF4O00268 1085 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 TIMM44O43615 452 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 TJP3O95049 919 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 GAS8O95995 478 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 IGLV3-19P01714 112 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 RARAP10276 462 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 PSMA2P25787 234 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 ZNF234Q14588 700 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 EIF4HQ15056 248 aaKnown RBP16.44■□□□□ 0.22
ACTN1-209ENST00000553659 SIX1Q15475 284 aaPredicted RBP16.44■□□□□ 0.22
ACTN1-209ENST00000553659 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 C2CD6Q53TS8 623 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 RAB41Q5JT25 222 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 DUPD1Q68J44 220 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 DENND1CQ8IV53 801 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 CCDC50Q8IVM0 306 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms