RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 IL31Q6EBC2 164 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 LAIR1Q6GTX8 287 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 C11orf63Q6NUN7 778 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 PRR23BQ6ZRT6 265 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 Q6ZVU0 165 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 CPNE8Q86YQ8 564 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 TMPRSS6Q8IU80 811 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 TXLNBQ8N3L3 684 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 ATP11CQ8NB49 1132 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 CCDC112Q8NEF3 446 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 PRCCQ92733 491 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 PTPRN2Q92932 1015 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SIPA1Q96FS4 1042 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 HMCESQ96FZ2 354 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 ZC3H10Q96K80 434 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 CCDC114Q96M63 670 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 CSPG4P5Q96PW8 444 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SPON2Q9BUD6 331 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 CEP44Q9C0F1 390 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SLC6A17Q9H1V8 727 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 LRRC19Q9H756 370 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 SCML1Q9UN30 329 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 CACNA1EQ15878 2313 aa11.97□□□□□ -0.49
TRAFD1-209ENST00000552896 IGHV1OR15-9A0A0B4J2B8 117 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 ZNF487B1APH4 448 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 RASA4BC9J798 803 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 DCLK1O15075 740 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 RASA4O43374 803 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 KDELR3O43731 214 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 BUB1BO60566 1050 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 RNASEH1O60930 286 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 ADH1BP00325 375 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 MT-CO1P00395 513 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 VAV1P15498 845 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 ERCC2P18074 760 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 BCKDHBP21953 392 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 ARSEP51690 589 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 DPYSL3Q14195 570 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 PDK2Q15119 407 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 DLG2Q15700 870 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 ELF2Q15723 593 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 PLK5Q496M5 336 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 PMS2CLQ68D20 193 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 TMCO3Q6UWJ1 677 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 LINGO4Q6UY18 593 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 SLC36A4Q6YBV0 504 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 DSG4Q86SJ6 1040 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 VSIG1Q86XK7 387 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 CACUL1Q86Y37 369 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 LZTR1Q8N653 840 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 PCDH20Q8N6Y1 951 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 NPWQ8N729 165 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 CASKIN2Q8WXE0 1202 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 OR8D1Q8WZ84 308 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 ISG20Q96AZ6 181 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 KLC2Q9H0B6 622 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 MTG2Q9H4K7 406 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 CYP8B1Q9UNU6 501 aa11.96□□□□□ -0.49
TRAFD1-209ENST00000552896 GON4LQ3T8J9 2241 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 DOCK9Q9BZ29 2069 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 LRRK1Q38SD2 2015 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 RCCD1A6NED2 376 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 ARHGAP42A6NI28 874 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 PJA2O43164 708 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 PSTPIP1O43586 416 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 SPOPO43791 374 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 DNTTP04053 509 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 ACADMP11310 421 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 SERPINB6P35237 376 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 NOP2P46087 812 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 TPMTP51580 245 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 RPS14P62263 151 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 CST6Q15828 149 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 ACCSLQ4AC99 568 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 SPDYCQ5MJ68 293 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 USP30Q70CQ3 517 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 ASCL5Q7RTU5 278 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 KIAA1328Q86T90 577 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 KBTBD6Q86V97 674 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 ZNF354CQ86Y25 554 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 MAP7D3Q8IWC1 876 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 ARHGAP12Q8IWW6 846 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 STK40Q8N2I9 435 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 FAM160A2Q8N612 972 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 RLN3Q8WXF3 142 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 FAF2Q96CS3 445 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 LOXL4Q96JB6 756 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 DUSP15Q9H1R2 295 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 PABPC3Q9H361 631 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 PDFQ9HBH1 243 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 CD93Q9NPY3 652 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 ITM2CQ9NQX7 267 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 MBD1Q9UIS9 605 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 GMEB2Q9UKD1 530 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 TFR2Q9UP52 801 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 DMXL1Q9Y485 3027 aa11.95□□□□□ -0.5
TRAFD1-209ENST00000552896 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms