RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 DDX50Q9BQ39 737 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 CALN1Q9BXU9 219 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 IMPG2Q9BZV3 1241 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 NUCKS1Q9H1E3 243 aaKnown RBP11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 SLC25A18Q9H1K4 315 aa11.7□□□□□ -0.54
SUPT16H-202ENST00000552829 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 NTN3O00634 580 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 TPP1O14773 563 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 MCF2LO15068 1137 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 MAPK13O15264 365 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 ALOX15BO15296 676 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 ATP9BO43861 1147 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 CSF2P04141 144 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 NR3C1P04150 777 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 NME1P15531 152 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 HNRNPA2B1P22626 353 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 NDUFA8P51970 172 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 TBX4P57082 545 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 SLC8A3P57103 927 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 CLDN2P57739 230 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 SLC12A1Q13621 1099 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 FZD2Q14332 565 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 CLCA4Q14CN2 919 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 CAMK4Q16566 473 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 ZNF542PQ5EBM4 170 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 RNF219Q5W0B1 726 aaPredicted RBP11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 DSG4Q86SJ6 1040 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 C14orf80Q86SX3 495 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 HORMAD1Q86X24 394 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 TTC39CQ8N584 583 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 WDR48Q8TAF3 677 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 SLC39A13Q96H72 371 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 BMFQ96LC9 184 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 MYOCQ99972 504 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 BOCQ9BWV1 1114 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 LRRC4Q9HBW1 653 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 FZD3Q9NPG1 666 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 CNGB3Q9NQW8 809 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 CISHQ9NSE2 258 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 DNAJC28Q9NX36 388 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 KLF15Q9UIH9 416 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 ZFR2Q9UPR6 939 aaKnown RBP11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 HS3ST3A1Q9Y663 406 aa11.69□□□□□ -0.54
SUPT16H-202ENST00000552829 SPTY2D1-AS1A0A0U1RR47 76 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 PDXKO00764 312 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 PLD2O14939 933 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 KLRC4O43908 158 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 WT1P19544 449 aaPredicted RBP11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 AKT2P31751 481 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 UGT1A5P35504 534 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 GCLMP48507 274 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 VAMP7P51809 220 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 SULT2A1Q06520 285 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 ENPEPQ07075 957 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 BST2Q10589 180 aaKnown RBP11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 NNTQ13423 1086 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 MORC3Q14149 939 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 GOLGA7BQ2TAP0 167 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 RESP18Q5W5W9 173 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 Q6ZSR6 202 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 IQUBQ8NA54 791 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 HTR3CQ8WXA8 447 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 SEMA4DQ92854 862 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 DHX58Q96C10 678 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 ALG14Q96F25 216 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 EPN3Q9H201 632 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 TSPAN16Q9UKR8 245 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 LRRK1Q38SD2 2015 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 DOPEY1Q5JWR5 2465 aa11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 RP1L1Q8IWN7 2480 aaPredicted RBP11.68□□□□□ -0.54
SUPT16H-202ENST00000552829 TYW5A2RUC4 315 aaKnown RBP11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 C1QTNF3-AMACRE9PGA6 284 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 NVLO15381 856 aaKnown RBP11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 FYNP06241 537 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 TRIM49P0CI25 452 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 TRIM49CP0CI26 452 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 LIPCP11150 499 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 CMA1P23946 247 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 NNMTP40261 264 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 STK4Q13043 487 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 EIF3IQ13347 325 aaKnown RBP11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 DRAP1Q14919 205 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 NR0B2Q15466 257 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 IGFBP7Q16270 282 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 CRTC1Q6UUV9 634 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 B3GNT8Q7Z7M8 397 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 CCDC117Q8IWD4 279 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 SLC35F3Q8IY50 421 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 FMR1NBQ8N0W7 255 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 SIX6OS1Q8N1H7 587 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 KIAA0895Q8NCT3 520 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 ZNF564Q8TBZ8 553 aaPredicted RBP11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 IRGQQ8WZA9 623 aa11.67□□□□□ -0.54
SUPT16H-202ENST00000552829 ERCC4Q92889 916 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms