RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 A0A087WUV0 522 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ILVBLA1L0T0 632 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 GFRA2O00451 464 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ZNF197O14709 1029 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 PER2O15055 1255 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 PSMD3O43242 534 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 RRP9O43818 475 aaKnown RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 RNF40O75150 1001 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 SPAG6O75602 509 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 TCEA3O75764 348 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 SUN1O94901 812 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 AP2A1O95782 977 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 PEX11BO96011 259 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 SHBGP04278 402 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 NFKB1P19838 968 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 PHBP35232 272 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ETFBP38117 255 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 GNA12Q03113 381 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ZNF177Q13360 481 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 STAT4Q14765 748 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 DUSP6Q16828 381 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 KRT71Q3SY84 523 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 PRSS36Q5K4E3 855 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 GPR158Q5T848 1215 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 KCTD11Q693B1 232 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 LRRC8BQ6P9F7 803 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 CMTM8Q8IZV2 173 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 HJURPQ8NCD3 748 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 FBXO36Q8NEA4 188 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 NSMCE1Q8WV22 266 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ARHGEF2Q92974 986 aaKnown RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ZNF599Q96NL3 588 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 CDCA3Q99618 268 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 CCDC77Q9BR77 488 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 TLE6Q9H808 572 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 PPCSQ9HAB8 311 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 TMBIM4Q9HC24 238 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 LRRC4CQ9HCJ2 640 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 AAR2Q9Y312 384 aaKnown RBP11.5□□□□□ -0.57
CACNB3-224ENST00000552812 CHD9Q3L8U1 2897 aa11.5□□□□□ -0.57
CACNB3-224ENST00000552812 ATG2AQ2TAZ0 1938 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 CCDC195A0A1B0GUA6 201 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 HMGB1P1B2RPK0 211 aaPredicted RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 AP3B1O00203 1094 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 PRAMEF11O60813 436 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 MOSPD3O75425 235 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ANXA9O76027 345 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 NEBLO76041 1014 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 IVLP07476 585 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 GJA1P17302 382 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 BMP8BP34820 402 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 AVPR1AP37288 418 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 FAM182AQ5T1J6 154 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 MPP7Q5T2T1 576 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 SYCP2LQ5T4T6 812 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 STXBP5Q5T5C0 1151 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 UBAP2Q5T6F2 1119 aaKnown RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 MARC1Q5VT66 337 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ADGRD2Q7Z7M1 963 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 TEX26Q8N6G2 289 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ARNTL2Q8WYA1 636 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ZNF707Q96C28 371 aaPredicted RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 PGM2Q96G03 612 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 GORASP1Q9BQQ3 440 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 WDR83Q9BRX9 315 aaKnown RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 CERS4Q9HA82 394 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 RBM22Q9NW64 420 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 CFAP97Q9P2B7 532 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 E2F8A0AVK6 867 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 J3KR12 359 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 LEFTY2O00292 366 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 RASGRF2O14827 1237 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 BANF1O75531 89 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 GSTA2P09210 222 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ELK3P41970 407 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 SGSHP51688 502 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 TEAD2Q15562 447 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 AGBL2Q5U5Z8 902 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 NAPEPLDQ6IQ20 393 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 LINC00523Q86TU6 105 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 RBM23Q86U06 439 aaKnown RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ZNF354CQ86Y25 554 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 PALM2Q8IXS6 379 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 PPP2R3CQ969Q6 453 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 TCEAL4Q96EI5 215 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 TMA16Q96EY4 203 aaKnown RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ZNF419Q96HQ0 510 aaPredicted RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 ATP6V1G3Q96LB4 118 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 LRRC40Q9H9A6 602 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 VPS37BQ9H9H4 285 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 GLOD4Q9HC38 313 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 HAUS2Q9NVX0 235 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 FETUBQ9UGM5 382 aa11.49□□□□□ -0.57
CACNB3-224ENST00000552812 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.49□□□□□ -0.57
CACNB3-224ENST00000552812 TRDMT1O14717 391 aaKnown RBP11.48□□□□□ -0.57
CACNB3-224ENST00000552812 AVILO75366 819 aa11.48□□□□□ -0.57
CACNB3-224ENST00000552812 LUC7L3O95232 432 aaKnown RBP11.48□□□□□ -0.57
CACNB3-224ENST00000552812 HLA-DQB2P05538 268 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms