RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 WDR5BQ86VZ2 330 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 RASSF3Q86WH2 238 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 CACUL1Q86Y37 369 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 TMPRSS6Q8IU80 811 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 CCDC50Q8IVM0 306 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 NPWQ8N729 165 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 NETO2Q8NC67 525 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 PCDH19Q8TAB3 1148 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 PRCCQ92733 491 aaPredicted RBP13.41□□□□□ -0.26
CHPT1-207ENST00000552213 SIPA1Q96FS4 1042 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 MRGPRX1Q96LB2 322 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 CCDC114Q96M63 670 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 SLC6A17Q9H1V8 727 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 FBRSQ9HAH7 460 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 PRDM16Q9HAZ2 1276 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 AMFRQ9UKV5 643 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 PPP2R2CQ9Y2T4 447 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 MFHAS1Q9Y4C4 1052 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
CHPT1-207ENST00000552213 R4GN57 208 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 ZNF318Q5VUA4 2279 aa13.41□□□□□ -0.26
CHPT1-207ENST00000552213 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 SMAD6O43541 496 aaKnown RBP13.4□□□□□ -0.26
CHPT1-207ENST00000552213 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
CHPT1-207ENST00000552213 ACADMP11310 421 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 VAV1P15498 845 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 NDUFV2P19404 249 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 USP39Q53GS9 565 aaKnown RBP13.4□□□□□ -0.26
CHPT1-207ENST00000552213 C9orf64Q5T6V5 341 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 AFMIDQ63HM1 303 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 C22orf39Q6P5X5 142 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 Q6ZVU0 165 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 RFX6Q8HWS3 928 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 ARHGAP12Q8IWW6 846 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 KATNAL2Q8IYT4 538 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 RCOR2Q8IZ40 523 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 LRRC57Q8N9N7 239 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 FRS2Q8WU20 508 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 KRT35Q92764 455 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 FAF2Q96CS3 445 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 RBM41Q96IZ5 413 aaKnown RBP13.4□□□□□ -0.26
CHPT1-207ENST00000552213 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 CEP44Q9C0F1 390 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 MKRN2Q9H000 416 aaKnown RBP13.4□□□□□ -0.26
CHPT1-207ENST00000552213 KLC2Q9H0B6 622 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 TNKS2Q9H2K2 1166 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 SP110Q9HB58 689 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 CD248Q9HCU0 757 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 FAM86C1Q9NVL1 165 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 UBA2Q9UBT2 640 aaPredicted RBP13.4□□□□□ -0.26
CHPT1-207ENST00000552213 FCF1Q9Y324 198 aaKnown RBP13.4□□□□□ -0.26
CHPT1-207ENST00000552213 ACTL7AQ9Y615 435 aa13.4□□□□□ -0.26
CHPT1-207ENST00000552213 CXorf51AA0A1B0GTR3 108 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 C3orf70A6NLC5 250 aaPredicted RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 ZNF487B1APH4 448 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 J3KR12 359 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 APOL1O14791 398 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 FTCDO95954 541 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 ZFXP17010 805 aaPredicted RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 CTNNA1P35221 906 aaKnown RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 CETN2P41208 172 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 MARCKSL1P49006 195 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 COPAP53621 1224 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 RWDD2BP57060 319 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 BYSLQ13895 437 aaKnown RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 ELAVL3Q14576 367 aaKnown RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 KAZNQ674X7 775 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 ZNF776Q68DI1 518 aaPredicted RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 NCBP2-AS2Q69YL0 99 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 MFSD7Q6UXD7 560 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 CEP68Q76N32 757 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 DSG4Q86SJ6 1040 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 NT5DC3Q86UY8 548 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 VSIG1Q86XK7 387 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 STK40Q8N2I9 435 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 RYBPQ8N488 228 aaPredicted RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 ATPAF2Q8N5M1 289 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 PCDH20Q8N6Y1 951 aaKnown RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 UBL4BQ8N7F7 174 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 EXD1Q8NHP7 514 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 CASKIN2Q8WXE0 1202 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 OR8D1Q8WZ84 308 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 NELL1Q92832 810 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 SPACA7Q96KW9 195 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 KCNF1Q9H3M0 494 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 IPO11Q9UI26 975 aaKnown RBP13.39□□□□□ -0.27
CHPT1-207ENST00000552213 INVSQ9Y283 1065 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
CHPT1-207ENST00000552213 MIF4GDA9UHW6 222 aaKnown RBP13.38□□□□□ -0.27
CHPT1-207ENST00000552213 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
CHPT1-207ENST00000552213 MFSD11O43934 449 aa13.38□□□□□ -0.27
CHPT1-207ENST00000552213 PRAMEF11O60813 436 aa13.38□□□□□ -0.27
CHPT1-207ENST00000552213 ZNF217O75362 1048 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms