RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PSMA2P25787 234 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 MAPK8P45983 427 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 PPM1JQ5JR12 505 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 KIAA0895LQ68EN5 471 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 ZCCHC9Q8N567 271 aaKnown RBP19.42■□□□□ 0.7
DDX54-208ENST00000551344 OR2T34Q8NGX1 318 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 EPAS1Q99814 870 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 NCAPGQ9BPX3 1015 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.42■□□□□ 0.7
DDX54-208ENST00000551344 XPO4Q9C0E2 1151 aaKnown RBP19.42■□□□□ 0.7
DDX54-208ENST00000551344 CEP44Q9C0F1 390 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 NDFIP2Q9NV92 336 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 DNAI1Q9UI46 699 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 TPX2Q9ULW0 747 aaKnown RBP19.42■□□□□ 0.7
DDX54-208ENST00000551344 NEU3Q9UQ49 428 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 SCINQ9Y6U3 715 aa19.42■□□□□ 0.7
DDX54-208ENST00000551344 CACNA1EQ15878 2313 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 SPTBN2O15020 2390 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 EIF3CLB5ME19 914 aaKnown RBP19.41■□□□□ 0.7
DDX54-208ENST00000551344 C1QTNF3-AMACRE9PGA6 284 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 K7ERQ8 282 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 SLC7A4O43246 635 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 ATMINO43313 823 aaPredicted RBP19.41■□□□□ 0.7
DDX54-208ENST00000551344 CBFA2T2O43439 604 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 SMAD6O43541 496 aaKnown RBP19.41■□□□□ 0.7
DDX54-208ENST00000551344 RNF8O76064 485 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 FSBPO95073 299 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 GYPCP04921 128 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 GLDCP23378 1020 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 CD27P26842 260 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 EPHB2P29323 1055 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 HTR7P34969 479 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 UAP1L1Q3KQV9 507 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 LINGO4Q6UY18 593 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 DNAAF5Q86Y56 855 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 PYROXD2Q8N2H3 581 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 TMIEQ8NEW7 156 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 OR2A12Q8NGT7 310 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 SNX19Q92543 992 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 ARHGEF2Q92974 986 aaKnown RBP19.41■□□□□ 0.7
DDX54-208ENST00000551344 FAM131CQ96AQ9 280 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 ZNF653Q96CK0 615 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 EIF3CQ99613 913 aaKnown RBP19.41■□□□□ 0.7
DDX54-208ENST00000551344 GTPBP2Q9BX10 602 aaKnown RBP19.41■□□□□ 0.7
DDX54-208ENST00000551344 KDM4CQ9H3R0 1056 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 FSCN3Q9NQT6 498 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 DONSONQ9NYP3 566 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 SARDHQ9UL12 918 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 HPCAL4Q9UM19 191 aa19.41■□□□□ 0.7
DDX54-208ENST00000551344 LAMA1P25391 3075 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 MED19A0JLT2 244 aaPredicted RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 FAM47DPA6NHR8 397 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 BNIP3LO60238 219 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 RAMP2O60895 175 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 CASP14P31944 242 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 CHRNA3P32297 505 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 DRD3P35462 400 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 RECQLP46063 649 aaPredicted RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 SERPINH1P50454 418 aaKnown RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 AFF3P51826 1226 aaKnown RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 GEMIN4P57678 1058 aaKnown RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 ARF5P84085 180 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 CCDC15Q0P6D6 951 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 SEMA3BQ13214 749 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 POLD3Q15054 466 aaPredicted RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 NCEH1Q6PIU2 408 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 MINDY1Q8N5J2 469 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 RTL3Q8N8U3 475 aaKnown RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 OR14C36Q8NHC7 312 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 PIP4K2CQ8TBX8 421 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 CATSPERBQ9H7T0 1116 aa19.4■□□□□ 0.7
DDX54-208ENST00000551344 DNAAF2Q9NVR5 837 aaKnown RBP19.4■□□□□ 0.7
DDX54-208ENST00000551344 WASH4PA8MWX3 477 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 UPK3BL1B0FP48 263 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 C10orf142B7Z368 130 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 UPK3BL2E5RIL1 263 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 CREB3O43889 395 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 OPHN1O60890 802 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 KCNK5O95279 499 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 PRNPP04156 253 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 IGHV4-34P06331 123 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 CSRP1P21291 193 aaKnown RBP19.39■□□□□ 0.69
DDX54-208ENST00000551344 HNRNPH3P31942 346 aaKnown RBP19.39■□□□□ 0.69
DDX54-208ENST00000551344 ACVRL1P37023 503 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 CCR5P51681 352 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 ADPRHP54922 357 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 YBEYP58557 167 aaPredicted RBP19.39■□□□□ 0.69
DDX54-208ENST00000551344 ACAP1Q15027 740 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 ERMARDQ5T6L9 678 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 C22orf39Q6P5X5 142 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 IL27RAQ6UWB1 636 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 PLPP6Q8IY26 295 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 ARFGAP1Q8N6T3 406 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 PCDH20Q8N6Y1 951 aaKnown RBP19.39■□□□□ 0.69
DDX54-208ENST00000551344 ISG20Q96AZ6 181 aaKnown RBP19.39■□□□□ 0.69
DDX54-208ENST00000551344 MYO1AQ9UBC5 1043 aa19.39■□□□□ 0.69
DDX54-208ENST00000551344 TBC1D3DA0A087WVF3 549 aa19.38■□□□□ 0.69
DDX54-208ENST00000551344 TBC1D3IA0A087WXS9 549 aa19.38■□□□□ 0.69
DDX54-208ENST00000551344 TBC1D3EA0A087X179 549 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms