RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 MIEF2Q96C03 454 aa6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 DCPSQ96C86 337 aaKnown RBP6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 TTYH1Q9H313 450 aaPredicted RBP6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 R3HDMLQ9H3Y0 253 aa6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 SYNPO2LQ9H987 977 aa6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 SNX8Q9Y5X2 465 aa6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 RBBP6Q7Z6E9 1792 aaKnown RBP6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 ZNF609O15014 1411 aa6.61□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3DA0A087WVF3 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3IA0A087WXS9 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3EA0A087X179 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3KA0A087X1G2 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3BA6NDS4 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3FA6NER0 549 aaPredicted RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3LB9A6J9 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 DIRC3C9JPN6 131 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 PPM1DO15297 605 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 NOBOXO60393 691 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TUBB4AP04350 444 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3HP0C7X1 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CSH1P0DML2 217 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CSH2P0DML3 217 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 IL11P20809 199 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 GATA3P23771 443 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RPS12P25398 132 aaKnown RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 MSX2P35548 267 aaPredicted RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 HADHAP40939 763 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CDH15P55291 814 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RIPK4P57078 832 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 DUSP28Q4G0W2 176 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 ZNF766Q5HY98 468 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 B3GNTL1Q67FW5 361 aaPredicted RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3GQ6DHY5 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3CQ6IPX1 549 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 SLC30A6Q6NXT4 461 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TBC1D3Q8IZP1 549 aaPredicted RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CCDC191Q8NCU4 936 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RUFY2Q8WXA3 655 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 SH3KBP1Q96B97 665 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 FAM120BQ96EK7 910 aaKnown RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 WDYHV1Q96HA8 205 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RADILQ96JH8 1075 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 NPAS1Q99742 590 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 MXD3Q9BW11 206 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RANBP17Q9H2T7 1088 aaKnown RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 MROH8Q9H579 483 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 SARDHQ9UL12 918 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CHST2Q9Y4C5 530 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 A0A1B0GUL6 1792 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CCDC187A0A096LP49 1063 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 GOLGA6L10A0A0M3HER8 536 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 A8MVJ9 347 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 KRT1P04264 644 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 MCCP23508 829 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 GRK5P34947 590 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 PCP4P48539 62 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 AFF3P51826 1226 aaKnown RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 EPHB4P54760 987 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 SLURP1P55000 103 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CYP2A13Q16696 494 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 ST3GAL2Q16842 350 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 HSP90AB3PQ58FF7 597 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 ARTNQ5T4W7 220 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 IKBIPQ70UQ0 350 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 SZRD1Q7Z422 152 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 PLEKHH3Q7Z736 793 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RAB11FIP4Q86YS3 637 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TMEM132CQ8N3T6 1108 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 D2HGDHQ8N465 521 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 ZNF366Q8N895 744 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 CLEC4CQ8WTT0 213 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TMEM125Q96AQ2 219 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 NACC2Q96BF6 587 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RSPRY1Q96DX4 576 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TRMT61AQ96FX7 289 aaKnown RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 MPHOSPH8Q99549 860 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 MNTQ99583 582 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 BAG1Q99933 345 aaPredicted RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 TEX101Q9BY14 249 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 PDE11AQ9HCR9 933 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RPS6KA6Q9UK32 745 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 ZNF215Q9UL58 517 aaPredicted RBP6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 SUFUQ9UMX1 484 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 FZD1Q9UP38 647 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 LYVE1Q9Y5Y7 322 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 MYH3P11055 1940 aa6.6□□□□□ -1.35
TGFBR1-208ENST00000550253 RANBP2P49792 3224 aaKnown RBP6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 OTOFQ9HC10 1997 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 MAPK8IP3Q9UPT6 1336 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 ECM29Q5VYK3 1845 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 PTGES3LE9PB15 166 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 UBE2Q2LH0YL09 131 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 RFXAPO00287 272 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 CHL1O00533 1208 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 VILLO15195 856 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 PDHA1P08559 390 aa6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 TMPOP42166 694 aaKnown RBP6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 RARSP54136 660 aaKnown RBP6.59□□□□□ -1.35
TGFBR1-208ENST00000550253 TLE3Q04726 772 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms