RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SMAD1Q15797 465 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 SLC45A4Q5BKX6 768 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 NAA35Q5VZE5 725 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 C22orf39Q6P5X5 142 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 MFSD2AQ8NA29 543 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 ATP11CQ8NB49 1132 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 OR2A12Q8NGT7 310 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 MDM1Q8TC05 714 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 SLC20A1Q8WUM9 679 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 C1orf74Q96LT6 269 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 CFAP57Q96MR6 1250 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 STK33Q9BYT3 514 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 CCDC86Q9H6F5 360 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 PREBQ9HCU5 417 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 DMTF1Q9Y222 760 aa17.82■□□□□ 0.44
CHMP1A-205ENST00000548650 LAMA5O15230 3695 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 CBX4O00257 560 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 SMAD6O43541 496 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 ZNF18P17022 549 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 GLDCP23378 1020 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 ARRB1P49407 418 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 CLCN6P51797 869 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 CCDC157Q569K6 752 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 CT47A1Q5JQC4 288 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 C6orf118Q5T5N4 469 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 ACBD5Q5T8D3 534 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 SFMBT2Q5VUG0 894 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 CDKAL1Q5VV42 579 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 LRRC31Q6UY01 552 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 LINGO4Q6UY18 593 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 KANSL1Q7Z3B3 1105 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 PRPF39Q86UA1 669 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 IQCHQ86VS3 1027 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 FAM131BQ86XD5 332 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 GALNT15Q8N3T1 639 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 MSANTD4Q8NCY6 345 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 CPA5Q8WXQ8 436 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 ARRDC3Q96B67 414 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 ERVMER34-1Q9H9K5 563 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 TMEM51Q9NW97 253 aa17.81■□□□□ 0.44
CHMP1A-205ENST00000548650 CELSR3Q9NYQ7 3312 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 FAM149AA5PLN7 773 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 RNF103O00237 685 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 ENC1O14682 589 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 ITGAVP06756 1048 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 CHRNA3P32297 505 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 RXRGP48443 463 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 KLK7P49862 253 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 CAMK2BQ13554 666 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 SETMARQ53H47 684 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 DHRS13Q6UX07 377 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 ARCQ7LC44 396 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 OXR1Q8N573 874 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 EMC1Q8N766 993 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 TMEM145Q8NBT3 493 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 CHST14Q8NCH0 376 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 OR7D4Q8NG98 312 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 CNDP2Q96KP4 475 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 CCDC114Q96M63 670 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 HAPLN3Q96S86 360 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 METTL5Q9NRN9 209 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 DKK4Q9UBT3 224 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 CA5BQ9Y2D0 317 aa17.8■□□□□ 0.44
CHMP1A-205ENST00000548650 MYLKQ15746 1914 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 KPNA3O00505 521 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 EPHB6O15197 1021 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 ZMPSTE24O75844 475 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 CYP1A1P04798 512 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 OR1E1P30953 314 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 ACADVLP49748 655 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 JAM2P57087 298 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 FMO1Q01740 532 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 CDR2Q01850 454 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 OVGP1Q12889 678 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 DNAJC3Q13217 504 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 KRT31Q15323 416 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 RAB6CQ53S08 254 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 ZNF783Q6ZMS7 281 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 CLEC17AQ6ZS10 378 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 ZNF677Q86XU0 584 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 EID2Q8N6I1 236 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 TMIEQ8NEW7 156 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 ENOX1Q8TC92 643 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 GRIN3AQ8TCU5 1115 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 ZYG11BQ9C0D3 744 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 RAB6CQ9H0N0 254 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 TNKS2Q9H2K2 1166 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 LHX6Q9UPM6 363 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 GPSM3Q9Y4H4 160 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 PCDHGA1Q9Y5H4 931 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 TRPM6Q9BX84 2022 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 KNTC1P50748 2209 aa17.79■□□□□ 0.44
CHMP1A-205ENST00000548650 ILVBLA1L0T0 632 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 PRAMEF26H0Y7S4 382 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 RNGTTO60942 597 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 SRGAP2O75044 1071 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 ZNF821O75541 412 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 GFPT2O94808 682 aa17.78■□□□□ 0.44
CHMP1A-205ENST00000548650 ENDOD1O94919 500 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms