RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 HDAC2Q92769 488 aaKnown RBP4.46□□□□□ -1.7
PTCH1-216ENST00000548379 MAP4K1Q92918 833 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 APOPT1Q96IL0 206 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 ADAD1Q96M93 576 aaKnown RBP4.46□□□□□ -1.7
PTCH1-216ENST00000548379 C7orf26Q96N11 449 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 CD180Q99467 661 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTCH1-216ENST00000548379 LMAN2LQ9H0V9 348 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 R3HDMLQ9H3Y0 253 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 MROH8Q9H579 483 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 PPP1R14DQ9NXH3 145 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 UPB1Q9UBR1 384 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 SUFUQ9UMX1 484 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 ARHGAP26Q9UNA1 814 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 CAMSAP1Q5T5Y3 1602 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 LTBP4Q8N2S1 1624 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 DIP2CQ9Y2E4 1556 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 A2MP01023 1474 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 MTUS2Q5JR59 1369 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 SYN3O14994 580 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 CCNT1O60563 726 aaKnown RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 BAIAP3O94812 1187 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 FSHBP01225 129 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 TSPY4P0CV99 314 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 TSPY10P0CW01 314 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 PRKCHP24723 683 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 GSTM2P28161 218 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 EIF5P55010 431 aaKnown RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 TGFB2P61812 414 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 HSF1Q00613 529 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 GOLGA8FQ08AF8 430 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 PTP4A2Q12974 167 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 NFIL3Q16649 462 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 PLK5Q496M5 336 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 ZNF766Q5HY98 468 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 UBAP2Q5T6F2 1119 aaKnown RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 INO80CQ6PI98 192 aaPredicted RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 PRIMA1Q86XR5 153 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 ARMC8Q8IUR7 673 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 UEVLDQ8IX04 471 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 FAM47BQ8NA70 645 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 SETD9Q8NE22 299 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 WIPF2Q8TF74 440 aaPredicted RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 RAB40AQ8WXH6 277 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 EFHD1Q9BUP0 239 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 NPLQ9BXD5 320 aaPredicted RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 INTS2Q9H0H0 1204 aaKnown RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 TTC12Q9H892 705 aaPredicted RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 ZDHHC7Q9NXF8 308 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 ARL15Q9NXU5 204 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 MAP3K20Q9NYL2 800 aaKnown RBP4.45□□□□□ -1.7
PTCH1-216ENST00000548379 HCN3Q9P1Z3 774 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 SLC25A13Q9UJS0 675 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 OSGIN2Q9Y236 505 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 CASKIN1Q8WXD9 1431 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 KIAA1107Q9UPP5 1409 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 KDM3AQ9Y4C1 1321 aa4.45□□□□□ -1.7
PTCH1-216ENST00000548379 TNRQ92752 1358 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 A0A087X0M5 115 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 A0A1B0GX30 115 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 SLC22A23A1A5C7 686 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 INPPL1O15357 1258 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 DDX58O95786 925 aaKnown RBP4.44□□□□□ -1.7
PTCH1-216ENST00000548379 HLA-DQA2P01906 255 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 WNT1P04628 370 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 ST6GAL1P15907 406 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 TFEBP19484 476 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 YPEL5P62699 121 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 RPP30P78346 268 aaKnown RBP4.44□□□□□ -1.7
PTCH1-216ENST00000548379 CFHR1Q03591 330 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 MTA1Q13330 715 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 IL13RA2Q14627 380 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 EARS2Q5JPH6 523 aaKnown RBP4.44□□□□□ -1.7
PTCH1-216ENST00000548379 C10orf76Q5T2E6 689 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 FBXO42Q6P3S6 717 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 ZNF788Q6ZQV5 615 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 MON1AQ86VX9 555 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 KLBQ86Z14 1044 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 C16orf71Q8IYS4 520 aaPredicted RBP4.44□□□□□ -1.7
PTCH1-216ENST00000548379 ARL14EPQ8N8R7 260 aaPredicted RBP4.44□□□□□ -1.7
PTCH1-216ENST00000548379 HASPINQ8TF76 798 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 RUFY2Q8WXA3 655 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 IP6K1Q92551 441 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 PIGKQ92643 395 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 CENPIQ92674 756 aaPredicted RBP4.44□□□□□ -1.7
PTCH1-216ENST00000548379 FRG2BQ96QU4 278 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 EYA3Q99504 573 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 SMC4Q9NTJ3 1288 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 NAALADL1Q9UQQ1 740 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 CNPY2Q9Y2B0 182 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 CLDN16Q9Y5I7 305 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 CPS1P31327 1500 aa4.44□□□□□ -1.7
PTCH1-216ENST00000548379 WDR33Q9C0J8 1336 aaKnown RBP4.44□□□□□ -1.7
PTCH1-216ENST00000548379 A2ML1A8K2U0 1454 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 TCOF1Q13428 1488 aaKnown RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 DHX29Q7Z478 1369 aaKnown RBP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ABCC1P33527 1531 aa4.43□□□□□ -1.7
PTCH1-216ENST00000548379 ARHGEF17Q96PE2 2063 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms