RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CIPCQ9C0C6 399 aa17.8■□□□□ 0.44
HDAC7-227ENST00000548080 ARGLU1Q9NWB6 273 aaPredicted RBP17.8■□□□□ 0.44
HDAC7-227ENST00000548080 GGA2Q9UJY4 613 aa17.8■□□□□ 0.44
HDAC7-227ENST00000548080 ZSCAN5CA6NGD5 496 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 E9PAM4 449 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 LUC7L3O95232 432 aaKnown RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 ITGAVP06756 1048 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 H2AFXP16104 143 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 TNFRSF8P28908 595 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 HTR7P34969 479 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 TNFRSF4P43489 277 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 NRG1Q02297 640 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 CSTF1Q05048 431 aaKnown RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 TCF15Q12870 199 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 MTA1Q13330 715 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 CDH18Q13634 790 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 PPP1R7Q15435 360 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 OASLQ15646 514 aaKnown RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 ARTNQ5T4W7 220 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 RNF43Q68DV7 783 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 NCBP2-AS2Q69YL0 99 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 CCNI2Q6ZMN8 369 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 TFAP2DQ7Z6R9 452 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 ZNF683Q8IZ20 524 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 SYNPOQ8N3V7 929 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 SPEM1Q8N4L4 309 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 ZNF513Q8N8E2 541 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 IL17RCQ8NAC3 791 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 TXNDC5Q8NBS9 432 aaKnown RBP17.79■□□□□ 0.44
HDAC7-227ENST00000548080 C1orf74Q96LT6 269 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 SLC2A11Q9BYW1 496 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 ETNK2Q9NVF9 386 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 SLC27A6Q9Y2P4 619 aa17.79■□□□□ 0.44
HDAC7-227ENST00000548080 DOCK4Q8N1I0 1966 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 A0A0A0MRY4 1105 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 DCLK1O15075 740 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 LRIG2O94898 1065 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 PABPC1P11940 636 aaKnown RBP17.78■□□□□ 0.44
HDAC7-227ENST00000548080 ERCC2P18074 760 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 PXNP49023 591 aaPredicted RBP17.78■□□□□ 0.44
HDAC7-227ENST00000548080 FUT11Q495W5 492 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 MPP7Q5T2T1 576 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 DUPD1Q68J44 220 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 CHST9Q7L1S5 443 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 GSTA5Q7RTV2 222 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 OR52K2Q8NGK3 314 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 CYB5D2Q8WUJ1 264 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 CASKIN2Q8WXE0 1202 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 SEC14L1Q92503 715 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 HHIPQ96QV1 700 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 CACNA2D2Q9NY47 1150 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 INTS6Q9UL03 887 aaKnown RBP17.78■□□□□ 0.44
HDAC7-227ENST00000548080 HCN4Q9Y3Q4 1203 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 HEY1Q9Y5J3 304 aa17.78■□□□□ 0.44
HDAC7-227ENST00000548080 A0A1B0GVM2 712 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 ESYT3A0FGR9 886 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 CCDC151A5D8V7 595 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 TCAF2A6NFQ2 919 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 WASH3PC4AMC7 463 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 SGK1O00141 431 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 ERLIN1O75477 346 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 RBP3P10745 1247 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 HNRNPLP14866 589 aaKnown RBP eCLIP17.77■□□□□ 0.44
HDAC7-227ENST00000548080 CXCL12P48061 93 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 DRG2P55039 364 aaKnown RBP17.77■□□□□ 0.44
HDAC7-227ENST00000548080 DMWDQ09019 674 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 CUL1Q13616 776 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 PTK6Q13882 451 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 DMC1Q14565 340 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 PAFAH1B3Q15102 231 aaKnown RBP17.77■□□□□ 0.44
HDAC7-227ENST00000548080 PREPLQ4J6C6 727 aaPredicted RBP17.77■□□□□ 0.44
HDAC7-227ENST00000548080 ACBD5Q5T8D3 534 aaPredicted RBP17.77■□□□□ 0.44
HDAC7-227ENST00000548080 MANEALQ5VSG8 457 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 HEATR6Q6AI08 1181 aaKnown RBP17.77■□□□□ 0.44
HDAC7-227ENST00000548080 FBXO38Q6PIJ6 1188 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 LRRC31Q6UY01 552 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 BZW1Q7L1Q6 419 aaKnown RBP17.77■□□□□ 0.44
HDAC7-227ENST00000548080 APCDD1Q8J025 514 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 FIBINQ8TAL6 211 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 IFT81Q8WYA0 676 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 LMLNQ96KR4 655 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 FAM114A2Q9NRY5 505 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 FAM86C1Q9NVL1 165 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 NEU2Q9Y3R4 380 aa17.77■□□□□ 0.44
HDAC7-227ENST00000548080 H7C0C1 242 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 ADAM23O75077 832 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 MZF1P28698 734 aaPredicted RBP17.76■□□□□ 0.43
HDAC7-227ENST00000548080 EPHB2P29323 1055 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 CSKP41240 450 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 ATP5OP48047 213 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 GBE1Q04446 702 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 SLC10A2Q12908 348 aaPredicted RBP17.76■□□□□ 0.43
HDAC7-227ENST00000548080 XRCC4Q13426 336 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 TRADDQ15628 312 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 MBLAC2Q68D91 279 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 CXorf57Q6NSI4 855 aaKnown RBP17.76■□□□□ 0.43
HDAC7-227ENST00000548080 RWDD4Q6NW29 188 aaKnown RBP17.76■□□□□ 0.43
HDAC7-227ENST00000548080 DARS2Q6PI48 645 aaKnown RBP17.76■□□□□ 0.43
HDAC7-227ENST00000548080 TMCO3Q6UWJ1 677 aa17.76■□□□□ 0.43
HDAC7-227ENST00000548080 ADIPOR2Q86V24 386 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms