RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 SLC2A13Q96QE2 648 aa14.84□□□□□ -0.03
USP15-206ENST00000546718 PSMB7Q99436 277 aa14.84□□□□□ -0.03
USP15-206ENST00000546718 NLGN3Q9NZ94 848 aa14.84□□□□□ -0.03
USP15-206ENST00000546718 COX16Q9P0S2 106 aa14.84□□□□□ -0.03
USP15-206ENST00000546718 VANGL2Q9ULK5 521 aa14.84□□□□□ -0.03
USP15-206ENST00000546718 ZFR2Q9UPR6 939 aaKnown RBP14.84□□□□□ -0.03
USP15-206ENST00000546718 TDRD6O60522 2096 aaKnown RBP14.83□□□□□ -0.03
USP15-206ENST00000546718 NAV2Q8IVL1 2488 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 CYSRT1A8MQ03 144 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 K7ERQ8 282 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 KPNA3O00505 521 aaPredicted RBP14.83□□□□□ -0.04
USP15-206ENST00000546718 LZTS3O60299 673 aaPredicted RBP14.83□□□□□ -0.04
USP15-206ENST00000546718 NEBLO76041 1014 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 GP1BAP07359 652 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 SLC2A3P11169 496 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 ZNF18P17022 549 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 HNRNPA2B1P22626 353 aaKnown RBP14.83□□□□□ -0.04
USP15-206ENST00000546718 LSSP48449 732 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 UCNP55089 124 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 ERVPABLB-1P60509 514 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 RHDQ02161 417 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 TMEM259Q4ZIN3 620 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 HS1BP3Q53T59 392 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 TAF1BQ53T94 588 aaPredicted RBP14.83□□□□□ -0.04
USP15-206ENST00000546718 ZNF542PQ5EBM4 170 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 SEL1L3Q68CR1 1132 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 TTI2Q6NXR4 508 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 NEK5Q6P3R8 708 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 ABI3BPQ7Z7G0 1075 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 DEFB106AQ8N104 65 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 EHBP1Q8NDI1 1231 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 ZNF606Q8WXB4 792 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 CCDC34Q96HJ3 373 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 MED15Q96RN5 788 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 INTS2Q9H0H0 1204 aaKnown RBP14.83□□□□□ -0.04
USP15-206ENST00000546718 POLR1BQ9H9Y6 1135 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 GPR27Q9NS67 375 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 SLC12A6Q9UHW9 1150 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 TBC1D30Q9Y2I9 924 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 HS3ST4Q9Y661 456 aa14.83□□□□□ -0.04
USP15-206ENST00000546718 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.82□□□□□ -0.04
USP15-206ENST00000546718 K7ESM1 405 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 PSMA7O14818 248 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 SNAP91O60641 907 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 GRAP2O75791 330 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 AKT2P31751 481 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 CHRNA3P32297 505 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 CDK17Q00537 523 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 CETN1Q12798 172 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 ZNF177Q13360 481 aaPredicted RBP14.82□□□□□ -0.04
USP15-206ENST00000546718 LY6DQ14210 128 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 C5orf22Q49AR2 442 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 OTUD1Q5VV17 481 aaPredicted RBP14.82□□□□□ -0.04
USP15-206ENST00000546718 OR6B2Q6IFH4 312 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 C14orf80Q86SX3 495 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 TRIM59Q8IWR1 403 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 WDTC1Q8N5D0 677 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 FAM181AQ8N9Y4 354 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 CHST14Q8NCH0 376 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 SNRNP27Q8WVK2 155 aaKnown RBP14.82□□□□□ -0.04
USP15-206ENST00000546718 KCNE4Q8WWG9 221 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 TTC9Q92623 222 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 SMARCE1Q969G3 411 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 WBP1Q96G27 269 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 CPXM1Q96SM3 734 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 VPS51Q9UID3 782 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
USP15-206ENST00000546718 PMS2P1A4D2B8 440 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 CAPN8A6NHC0 703 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 I6L893 689 aaPredicted RBP14.81□□□□□ -0.04
USP15-206ENST00000546718 SCAMP1O15126 338 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 KLK10O43240 276 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 THAP12O43422 761 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 MED7O43513 233 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 SMAD6O43541 496 aaKnown RBP14.81□□□□□ -0.04
USP15-206ENST00000546718 PAGE1O75459 146 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 CLDN11O75508 207 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 CNTN5O94779 1100 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 SMC2O95347 1197 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 ALPPL2P10696 532 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 TGM2P21980 687 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 RRM1P23921 792 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 GNA15P30679 374 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 FGL2Q14314 439 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 ALFQ53S48 1182 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 BROXQ5VW32 411 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 ISM2Q6H9L7 571 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 PTAR1Q7Z6K3 402 aaPredicted RBP14.81□□□□□ -0.04
USP15-206ENST00000546718 LSMEM2Q8N112 164 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 ATP11CQ8NB49 1132 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 ZNF548Q8NEK5 533 aaPredicted RBP14.81□□□□□ -0.04
USP15-206ENST00000546718 TMIEQ8NEW7 156 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 IFI44Q8TCB0 444 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 GRIN3AQ8TCU5 1115 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 RNF34Q969K3 372 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 IFT43Q96FT9 208 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 VCPIP1Q96JH7 1222 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.81□□□□□ -0.04
USP15-206ENST00000546718 MUC3BQ9H195 1237 aa14.81□□□□□ -0.04
USP15-206ENST00000546718 OSBPL2Q9H1P3 480 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms