RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 FBXL8Q96CD0 374 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 MS4A4AQ96JQ5 239 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 ILKAPQ9H0C8 392 aaPredicted RBP14.92□□□□□ -0.02
HOXC11-202ENST00000546378 Q9H521 79 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 EVLQ9UI08 416 aaPredicted RBP14.92□□□□□ -0.02
HOXC11-202ENST00000546378 E7ESA3 106 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
HOXC11-202ENST00000546378 CHRM3P20309 590 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 GARSP41250 739 aaKnown RBP14.92□□□□□ -0.02
HOXC11-202ENST00000546378 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 GRIA3P42263 894 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 GHRHRQ02643 423 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 WASHC5Q12768 1159 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 PDZD8Q8NEN9 1154 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 SREK1Q8WXA9 508 aaKnown RBP14.92□□□□□ -0.02
HOXC11-202ENST00000546378 HDAC11Q96DB2 347 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 ELMO2Q96JJ3 720 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 SORT1Q99523 831 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 DHRS4Q9BTZ2 278 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 MMADHCQ9H3L0 296 aaPredicted RBP14.92□□□□□ -0.02
HOXC11-202ENST00000546378 PCDHA11Q9Y5I1 949 aa14.92□□□□□ -0.02
HOXC11-202ENST00000546378 PLOD2O00469 737 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 FAM58BPP0C7Q3 252 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 CYP2B6P20813 491 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 SNRPFP62306 86 aaKnown RBP14.91□□□□□ -0.02
HOXC11-202ENST00000546378 ITGA7Q13683 1181 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 PAF1Q8N7H5 531 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 ANKRD27Q96NW4 1050 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 BFARQ9NZS9 450 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 XPR1Q9UBH6 696 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 CPSF3Q9UKF6 684 aaKnown RBP14.91□□□□□ -0.02
HOXC11-202ENST00000546378 RNASEH2AO75792 299 aaKnown RBP14.91□□□□□ -0.02
HOXC11-202ENST00000546378 TFAP2AP05549 437 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 PIRTP0C851 137 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 PCNAP12004 261 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 NCAM1P13591 858 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 ARL2P36404 184 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 GRM3Q14832 879 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 OR6P1Q8NGX9 317 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 MROH8Q9H579 483 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 FAM72CH0Y354 149 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 GABRB2P47870 512 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 ENTPD1P49961 510 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 NAA20P61599 178 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 MPP3Q13368 585 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 BOLA3Q53S33 107 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 FAM72AQ5TYM5 149 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 FAM72DQ6L9T8 149 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 B3GNT6Q6ZMB0 384 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 FAM72BQ86X60 149 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 SNX29P2Q8IUI4 249 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 DDIASQ8IXT1 998 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.91□□□□□ -0.02
HOXC11-202ENST00000546378 URGCPQ8TCY9 931 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 IFT43Q96FT9 208 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 B3GALT6Q96L58 329 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 KLHL32Q96NJ5 620 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 ACE2Q9BYF1 805 aaPredicted RBP14.91□□□□□ -0.02
HOXC11-202ENST00000546378 FAM192AQ9GZU8 254 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 ATXN10Q9UBB4 475 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 VANGL2Q9ULK5 521 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 COMMD10Q9Y6G5 202 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 CDH23Q9H251 3354 aa14.91□□□□□ -0.02
HOXC11-202ENST00000546378 F8W8V4 182 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ZBTB11O95625 1053 aaPredicted RBP14.9□□□□□ -0.02
HOXC11-202ENST00000546378 GNAO1P09471 354 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 INSRRP14616 1297 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 YWHAQP27348 245 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 NMBRP28336 390 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ZNF132P52740 706 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 MAP3K7CLP57077 242 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 SH2D5Q6ZV89 423 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 HFE2Q6ZVN8 426 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ZNF534Q76KX8 674 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ARHGAP18Q8N392 663 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 KCTD17Q8N5Z5 321 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 PSD4Q8NDX1 1056 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 NXNL1Q96CM4 212 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 RHOBTB2Q9BYZ6 727 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 LRRC4Q9HBW1 653 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 DOCK1Q14185 1865 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 TCRBV5S1A1TA0A578 114 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 TRIM13O60858 407 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ASLP04424 464 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 TFEBP19484 476 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 MAGEA10P43363 369 aaPredicted RBP14.9□□□□□ -0.02
HOXC11-202ENST00000546378 MYBPC1Q00872 1141 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 TTLL4Q14679 1199 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 RPS6KA2Q15349 733 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 GSTA3Q16772 222 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 GPR107Q5VW38 600 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 SYPL2Q5VXT5 272 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ZNF567Q8N184 647 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 DRAXINQ8NBI3 349 aaPredicted RBP14.9□□□□□ -0.02
HOXC11-202ENST00000546378 PDCD6IPQ8WUM4 868 aaKnown RBP14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ESAMQ96AP7 390 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 SERPINI1Q99574 410 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 CILPO75339 1184 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ARF4P18085 180 aaPredicted RBP14.9□□□□□ -0.02
HOXC11-202ENST00000546378 DPP6P42658 865 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms