RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TMEM110Q86TL2 294 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TTC30AQ86WT1 665 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 CLVS1Q8IUQ0 354 aaPredicted RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 HERC6Q8IVU3 1022 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 PCDH20Q8N6Y1 951 aaKnown RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 MTMR14Q8NCE2 650 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 CCNYQ8ND76 341 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 AFG1LQ8WV93 481 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TOP1MTQ969P6 601 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 SCYL1Q96KG9 808 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 FAM167AQ96KS9 214 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TEX13BQ9BXU2 312 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 FZD8Q9H461 694 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 TMEM165Q9HC07 324 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 ANLNQ9NQW6 1124 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 VPS45Q9NRW7 570 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 GTF2IRD1Q9UHL9 959 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 PAIP2BQ9ULR5 123 aaKnown RBP14.44□□□□□ -0.1
SRP54-202ENST00000546080 AFG3L2Q9Y4W6 797 aa14.44□□□□□ -0.1
SRP54-202ENST00000546080 BOLA2-SMG1P6H3BVE0 249 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 WNT10BO00744 389 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 CABYRO75952 493 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 JUNP05412 331 aaKnown RBP14.43□□□□□ -0.1
SRP54-202ENST00000546080 MCF2P10911 925 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 CDH15P55291 814 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 GK5Q6ZS86 529 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 ZNF567Q8N184 647 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 PYROXD2Q8N2H3 581 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 TTC39CQ8N584 583 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 LZTR1Q8N653 840 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 ISOC1Q96CN7 298 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 CIB1Q99828 191 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 ANKRD60Q9BZ19 345 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 UTP6Q9NYH9 597 aaKnown RBP14.43□□□□□ -0.1
SRP54-202ENST00000546080 EBF1Q9UH73 591 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 TLK1Q9UKI8 766 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 TNFSF13BQ9Y275 285 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 PCDHGA7Q9Y5G6 932 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.43□□□□□ -0.1
SRP54-202ENST00000546080 SNX9Q9Y5X1 595 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 USP3Q9Y6I4 520 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 KCNU1A8MYU2 1149 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 HTRA2O43464 458 aaPredicted RBP14.43□□□□□ -0.1
SRP54-202ENST00000546080 GJB1P08034 283 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 PDGFRBP09619 1106 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 FAM163BP0C2L3 166 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 GLUD2P49448 558 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 CSE1LP55060 971 aaKnown RBP14.43□□□□□ -0.1
SRP54-202ENST00000546080 ITGA7Q13683 1181 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 GLRA4Q5JXX5 417 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 ITPRIPL1Q6GPH6 555 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 MAMDC4Q6UXC1 1216 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 ZDHHC17Q8IUH5 632 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 DNAAF3Q8N9W5 541 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 FAM47BQ8NA70 645 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 GIPC3Q8TF64 312 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 VPS39Q96JC1 886 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 SLC29A1Q99808 456 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 EFHD1Q9BUP0 239 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 BFARQ9NZS9 450 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 IPO11Q9UI26 975 aaKnown RBP14.43□□□□□ -0.1
SRP54-202ENST00000546080 SLC39A10Q9ULF5 831 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 VANGL2Q9ULK5 521 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 ANKRD6Q9Y2G4 727 aa14.43□□□□□ -0.1
SRP54-202ENST00000546080 A0A087WXM4 84 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 HEATR9A2RTY3 570 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 E7ENX8 843 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 CBFA2T3O75081 653 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 USP12O75317 370 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 SAT1P21673 171 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 VARSP26640 1264 aaKnown RBP14.42□□□□□ -0.1
SRP54-202ENST00000546080 SLC7A1P30825 629 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 PHKA2P46019 1235 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 GLRBP48167 497 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 BACE1P56817 501 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 ANO4Q32M45 955 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 PKDCCQ504Y2 493 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 PID1Q7Z2X4 250 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 TMEM135Q86UB9 458 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 GPR180Q86V85 440 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 KCNMB4Q86W47 210 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 ACVR1CQ8NER5 493 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 CLEC4CQ8WTT0 213 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 SEPT1Q8WYJ6 367 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 LPGAT1Q92604 370 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 CENPIQ92674 756 aaPredicted RBP14.42□□□□□ -0.1
SRP54-202ENST00000546080 PBXIP1Q96AQ6 731 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 PPWD1Q96BP3 646 aaKnown RBP14.42□□□□□ -0.1
SRP54-202ENST00000546080 DCUN1D5Q9BTE7 237 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 C11orf84Q9BUA3 381 aaPredicted RBP14.42□□□□□ -0.1
SRP54-202ENST00000546080 UNC93B1Q9H1C4 597 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 TBC1D23Q9NUY8 699 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 PHIPQ8WWQ0 1821 aa14.42□□□□□ -0.1
SRP54-202ENST00000546080 ZCWPW2A0A1B0GU75 182 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 PLOD2O00469 737 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 DDHD2O94830 711 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 HSPA1AP0DMV8 641 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 HSPA1BP0DMV9 641 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 PSMD8P48556 350 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms