RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SCN4BQ8IWT1 228 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 C2CD4CQ8TF44 421 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 CPT1BQ92523 772 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 ARRDC3Q96B67 414 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 VPS33BQ9H267 617 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 ABHD16BQ9H3Z7 469 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 LRCH1Q9Y2L9 728 aa5.09□□□□□ -1.59
SNHG1-224ENST00000545688 NESP48681 1621 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 VWA5AO00534 786 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 LDB2O43679 373 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 SKAP2O75563 359 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-224ENST00000545688 GLUD1P00367 558 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 HLA-DQA2P01906 255 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 IFIT2P09913 472 aaKnown RBP5.08□□□□□ -1.6
SNHG1-224ENST00000545688 FCGR2AP12318 317 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 SERPINA4P29622 427 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 GLUD2P49448 558 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 DSC1Q08554 894 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 ZNF284Q2VY69 593 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 MAP9Q49MG5 647 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 HEPHL1Q6MZM0 1159 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 ATG16L2Q8NAA4 619 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 CEP76Q8TAP6 659 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 C3orf49Q96BT1 292 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 PIGSQ96S52 555 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 WDR12Q9GZL7 423 aaKnown RBP5.08□□□□□ -1.6
SNHG1-224ENST00000545688 PABPC3Q9H361 631 aaKnown RBP5.08□□□□□ -1.6
SNHG1-224ENST00000545688 C6orf106Q9H6K1 298 aaPredicted RBP5.08□□□□□ -1.6
SNHG1-224ENST00000545688 RMI1Q9H9A7 625 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 CDH22Q9UJ99 828 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 PCDHGB1Q9Y5G3 927 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 RAI2Q9Y5P3 530 aa5.08□□□□□ -1.6
SNHG1-224ENST00000545688 THOC2Q8NI27 1593 aaKnown RBP5.08□□□□□ -1.6
SNHG1-224ENST00000545688 ATAD2BQ9ULI0 1458 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 PRSS2P07478 247 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 GNLYP22749 145 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 PRKCHP24723 683 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 SERPINF1P36955 418 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 ART1P52961 327 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 GAS1P54826 345 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 TNFAIP2Q03169 654 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 HYAL1Q12794 435 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 DCTN1Q14203 1278 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 PUM3Q15397 648 aaKnown RBP5.07□□□□□ -1.6
SNHG1-224ENST00000545688 IZUMO4Q1ZYL8 232 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 LRRC24Q50LG9 513 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 DGAT2L7PQ6IED9 249 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 SYNE3Q6ZMZ3 975 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 NR2C2APQ86WQ0 139 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 ZNF333Q96JL9 665 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 FRG2BQ96QU4 278 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 CLPBQ9H078 707 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.07□□□□□ -1.61e-6■■□□□ 14.4
SNHG1-224ENST00000545688 CDT1Q9H211 546 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 NDUFAF4Q9P032 175 aa5.07□□□□□ -1.6
SNHG1-224ENST00000545688 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-224ENST00000545688 ACKR2O00590 384 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 SYN3O14994 580 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 HNRNPRO43390 633 aaKnown RBP5.06□□□□□ -1.6
SNHG1-224ENST00000545688 PPP1R3DO95685 299 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 DDAH2O95865 285 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 THPOP40225 353 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 RPL36AP83881 106 aaKnown RBP5.06□□□□□ -1.6
SNHG1-224ENST00000545688 SYTL3Q4VX76 610 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 TDRD12Q587J7 1177 aaKnown RBP5.06□□□□□ -1.6
SNHG1-224ENST00000545688 SULT6B1Q6IMI4 303 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 C8orf82Q6P1X6 216 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-224ENST00000545688 PRSS57Q6UWY2 283 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 RRAGAQ7L523 313 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 CCDC117Q8IWD4 279 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-224ENST00000545688 CLIP4Q8N3C7 705 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 FAR1Q8WVX9 515 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 IFT27Q9BW83 186 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 ACAD9Q9H845 621 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 LRFN1Q9P244 771 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 UPB1Q9UBR1 384 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 KLQ9UEF7 1012 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 KCND3Q9UK17 655 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 BAG5Q9UL15 447 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 MST1RQ04912 1400 aa5.06□□□□□ -1.6
SNHG1-224ENST00000545688 TMEM247A6NEH6 219 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 FAM90A20PA6NIJ5 464 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 HSPB6O14558 160 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 CLDN7O95471 211 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 MYZAPP0CAP1 466 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 SETSIPP0DME0 302 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 ITGB8P26012 769 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 AVPR2P30518 371 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 CLCN5P51795 746 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 PDCLQ13371 301 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 TOGARAM2Q6ZUX3 1019 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 TRIM74Q86UV6 250 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 TRIM73Q86UV7 250 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 PTGR2Q8N8N7 351 aaPredicted RBP5.05□□□□□ -1.6
SNHG1-224ENST00000545688 OR14A16Q8NHC5 309 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 HDAC7Q8WUI4 952 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 SLC35F5Q8WV83 523 aa5.05□□□□□ -1.6
SNHG1-224ENST00000545688 RMDN3Q96TC7 470 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms