RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 DLL3Q9NYJ7 618 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 NKIRAS2Q9NYR9 191 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ANKFY1Q9P2R3 1169 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 HDAC6Q9UBN7 1215 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 CCNL1Q9UK58 526 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 AMFRQ9UKV5 643 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 B3GNT3Q9Y2A9 372 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 COX11Q9Y6N1 276 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 ZC3H13Q5T200 1668 aaKnown RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 INO80Q9ULG1 1556 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-222ENST00000545308 AFF2P51816 1311 aa4.44□□□□□ -1.7
SNHG1-222ENST00000545308 COL11A2P13942 1736 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 SYCP2Q9BX26 1530 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 GPATCH8Q9UKJ3 1502 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 SHPRHQ149N8 1683 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 GOLGA6L10A0A0M3HER8 536 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 GAGE10A6NGK3 116 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 C3orf70A6NLC5 250 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 ZNF213O14771 459 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 ORC4O43929 436 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 PLOD3O60568 738 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 GJB3O75712 270 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 NXPH3O95157 252 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 METTL18O95568 372 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 C1RP00736 705 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 ALDOAP04075 364 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 HSPA1AP0DMV8 641 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 HSPA1BP0DMV9 641 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 NR2F6P10588 404 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 EGR2P11161 476 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 ITGAMP11215 1152 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 MYCLP12524 364 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 AKR1B1P15121 316 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 MATN1P21941 496 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 FPR3P25089 353 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 DUSP1P28562 367 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 ICAM3P32942 547 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 HNF1BP35680 557 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 GPD2P43304 727 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 AGTR2P50052 363 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 JAK3P52333 1124 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 RPS3AP61247 264 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 CUL4AQ13619 759 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 NAA25Q14CX7 972 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 KIAA0895LQ68EN5 471 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 MTHFD1LQ6UB35 978 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 PARS2Q7L3T8 475 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 SCN4BQ8IWT1 228 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 LAS2Q8IYD9 372 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 CNTROBQ8N137 903 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 RP9Q8TA86 221 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 TFAP2BQ92481 460 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 USP6NLQ92738 828 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 NSUN4Q96CB9 384 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 SNX18Q96RF0 628 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 CD180Q99467 661 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 THAP7Q9BT49 309 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 CINPQ9BW66 212 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 VEZTQ9HBM0 779 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 DUSP22Q9NRW4 184 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 PPP1R14DQ9NXH3 145 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 ALKBH4Q9NXW9 302 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 ADD3Q9UEY8 706 aaKnown RBP4.43□□□□□ -1.7
SNHG1-222ENST00000545308 SARDHQ9UL12 918 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 CASKIN1Q8WXD9 1431 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 UBR1Q8IWV7 1749 aa4.43□□□□□ -1.7
SNHG1-222ENST00000545308 MTUS2Q5JR59 1369 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SLIT1O75093 1534 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 KDM5AP29375 1690 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 CHD2O14647 1828 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 TEX22C9J3V5 150 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 AP3D1O14617 1153 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SYN3O14994 580 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 PDE8BO95263 885 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 TUBB4AP04350 444 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 DLDP09622 509 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 PORP16435 677 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 ENGP17813 658 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SFPQP23246 707 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 PSMA4P25789 261 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 KRT20P35900 424 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 AVPR1BP47901 424 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SLC37A1P57057 533 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 UFM1P61960 85 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 ARHGAP8P85298 464 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SHC2P98077 582 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 B4GALNT1Q00973 533 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 MAMLD1Q13495 774 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 CCDC96Q2M329 555 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 RNASE12Q5GAN4 147 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 MTFR2Q6P444 385 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 KIRREL2Q6UWL6 708 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SLC39A5Q6ZMH5 540 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 RD3Q7Z3Z2 195 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 ADGRF3Q8IZF5 1079 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 LCORLQ8N3X6 602 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 C12orf76Q8N812 135 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 LINC00476Q8WZB0 136 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 Q96MF0 132 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms