RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PCDHGA7Q9Y5G6 932 aa7.08□□□□□ -1.28
LDHA-223ENST00000545215 AQP7O14520 342 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 VILLO15195 856 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 ERLIN2O94905 339 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 PRAMEF1O95521 474 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 LIPCP11150 499 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 GLB1P16278 677 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 BPIP17213 487 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 CAPN3P20807 821 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 EPHA8P29322 1005 aaPredicted RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 MARCKSP29966 332 aaPredicted RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 YWHABP31946 246 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 TPMTP51580 245 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 TBX4P57082 545 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 UBE2HP62256 183 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 NCBP1Q09161 790 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 LAMTOR4Q0VGL1 99 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 BNIP3Q12983 259 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 CTTNQ14247 550 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 XKR9Q5GH70 373 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 HYIQ5T013 277 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 TXNDC8Q6A555 127 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 ZCCHC8Q6NZY4 707 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 KIAA1324Q6UXG2 1013 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 CCDC73Q6ZRK6 1079 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 UBE2R2Q712K3 238 aaPredicted RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 FAM214BQ7L5A3 538 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 OTUD6AQ7L8S5 288 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 TMEM150AQ86TG1 271 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 MIB1Q86YT6 1006 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 TPH2Q8IWU9 490 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 C4orf19Q8IY42 314 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 SVOPQ8N4V2 548 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 RNF149Q8NC42 400 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 WDR36Q8NI36 951 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 TCP11Q8WWU5 503 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 PRPF31Q8WWY3 499 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 SNX19Q92543 992 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 DYDC2Q96IM9 177 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 CDK5RAP3Q96JB5 506 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 CCDC43Q96MW1 224 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 NACC1Q96RE7 527 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 HSD17B14Q9BPX1 270 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 DUSP23Q9BVJ7 150 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 NUP58Q9BVL2 599 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 LRRC27Q9C0I9 530 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 CXCL16Q9H2A7 254 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 MAGEF1Q9HAY2 307 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 NOP53Q9NZM5 478 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 WRAP73Q9P2S5 460 aaPredicted RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 TPX2Q9ULW0 747 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 PCDHA7Q9UN72 937 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 ENTPD2Q9Y5L3 495 aa7.07□□□□□ -1.28
LDHA-223ENST00000545215 MYO18AQ92614 2054 aaKnown RBP7.07□□□□□ -1.28
LDHA-223ENST00000545215 FAM237AA0A1B0GTK4 181 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 TCP11X1B4DZS4 312 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 INO80B-WBP1J3KQ70 363 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ASAP2O43150 1006 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 GRID2O43424 1007 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 TSPAN6O43657 245 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 IGLV3-19P01714 112 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 GP1BAP07359 652 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 NOS3P29474 1203 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 LEPRP48357 1165 aaKnown RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 C21orf59P57076 290 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 MRPL49Q13405 166 aaKnown RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 DPY19L1Q2PZI1 675 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ACBD5Q5T8D3 534 aaPredicted RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 RESP18Q5W5W9 173 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 CENPPQ6IPU0 288 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ZNF280DQ6N043 979 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ABHD17CQ6PCB6 329 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 MON1AQ86VX9 555 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 SPATS2Q86XZ4 545 aaKnown RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 ADGRG2Q8IZP9 1017 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 IQUBQ8NA54 791 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 RASSF8Q8NHQ8 419 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 RELTQ969Z4 430 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ERLEC1Q96DZ1 483 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 GABRG3Q99928 467 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 EIF2AK1Q9BQI3 630 aaKnown RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 ACE2Q9BYF1 805 aaPredicted RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 KRTAP17-1Q9BYP8 105 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ABCG4Q9H172 646 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 STK17AQ9UEE5 414 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 DNM3Q9UQ16 869 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 PCDHA9Q9Y5H5 950 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 NPFFR2Q9Y5X5 522 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ST14Q9Y5Y6 855 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ZNF469Q96JG9 3925 aaPredicted RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 ARID1BQ8NFD5 2236 aaPredicted RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 ACANP16112 2415 aa7.06□□□□□ -1.28
LDHA-223ENST00000545215 ZNF638Q14966 1978 aaKnown RBP7.06□□□□□ -1.28
LDHA-223ENST00000545215 TBC1D3BA6NDS4 549 aa7.05□□□□□ -1.28
LDHA-223ENST00000545215 NEMP1O14524 444 aa7.05□□□□□ -1.28
LDHA-223ENST00000545215 PRICKLE3O43900 615 aaPredicted RBP7.05□□□□□ -1.28
LDHA-223ENST00000545215 SLITRK3O94933 977 aa7.05□□□□□ -1.28
LDHA-223ENST00000545215 MBD3O95983 291 aa7.05□□□□□ -1.28
LDHA-223ENST00000545215 CYP17A1P05093 508 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms