RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ERMARDQ5T6L9 678 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 DGLUCYQ7Z3D6 616 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 ZNF354CQ86Y25 554 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 HDDC3Q8N4P3 179 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 DNASE2BQ8WZ79 361 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 SNX19Q92543 992 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 DNAJC7Q99615 494 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 ACE2Q9BYF1 805 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-216ENST00000544996 MIR1-1HGQ9H1L0 117 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 AP4E1Q9UPM8 1137 aa16.08■□□□□ 0.16
CCDC78-216ENST00000544996 LRRC72A6NJI9 287 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 K7ERQ8 282 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 GLDCP23378 1020 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 MIPP30301 263 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 EIF4A3P38919 411 aaKnown RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 SERPINH1P50454 418 aaKnown RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 ATXN3P54252 364 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 TPI1P60174 286 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 ZNF252P-AS1Q0IIN9 211 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 PIGHQ14442 188 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 ERMP1Q7Z2K6 904 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 PSTKQ8IV42 348 aaKnown RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 RTL3Q8N8U3 475 aaKnown RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 ARHGEF2Q92974 986 aaKnown RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 TRIM7Q9C029 511 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 TRIM5Q9C035 493 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 CEP44Q9C0F1 390 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 THAP2Q9H0W7 228 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 NEUROG2Q9H2A3 272 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 DEF6Q9H4E7 631 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 DHX35Q9H5Z1 703 aaKnown RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 C6orf106Q9H6K1 298 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 TMEM9BQ9NQ34 198 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 NDFIP2Q9NV92 336 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 PPM1HQ9ULR3 514 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 NEU3Q9UQ49 428 aa16.07■□□□□ 0.16
CCDC78-216ENST00000544996 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-216ENST00000544996 A0A1B0GTW7 788 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 DAPK3O43293 454 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 SMAD6O43541 496 aaKnown RBP16.06■□□□□ 0.16
CCDC78-216ENST00000544996 ZMPSTE24O75844 475 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 CYP1A2P05177 515 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 SYPP08247 313 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 ENGP17813 658 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 PCK1P35558 622 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 ACVRL1P37023 503 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 YBEYP58557 167 aaPredicted RBP16.06■□□□□ 0.16
CCDC78-216ENST00000544996 CCDC15Q0P6D6 951 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 SEMA3BQ13214 749 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 DAB2IPQ5VWQ8 1189 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 C22orf39Q6P5X5 142 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 SARM1Q6SZW1 724 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 CNGA4Q8IV77 575 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 AADATQ8N5Z0 425 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 ARFGAP1Q8N6T3 406 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 OR2A12Q8NGT7 310 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 OR14C36Q8NHC7 312 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 NUP85Q9BW27 656 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 CAPN10Q9HC96 672 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 ABHD10Q9NUJ1 306 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 SERGEFQ9UGK8 458 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 IP6K2Q9UHH9 426 aa16.06■□□□□ 0.16
CCDC78-216ENST00000544996 EIF2B4Q9UI10 523 aaKnown RBP16.06■□□□□ 0.16
CCDC78-216ENST00000544996 SSU72P8A0A1W2PR75 194 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 DCDC2BA2VCK2 349 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 ZSCAN5CA6NGD5 496 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 C4orf47A7E2U8 309 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 WASH4PA8MWX3 477 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 EEF2KO00418 725 aaKnown RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 BCAT2O15382 392 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 KDELR3O43731 214 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 AKR1B10O60218 316 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 MFAP3LO75121 409 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 LRCH4O75427 683 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 FSBPO95073 299 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 PRNPP04156 253 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 CHRNA3P32297 505 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 MAPK8P45983 427 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 DNA2P51530 1060 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 ZNF135P52742 658 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 GALCP54803 685 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 ARF5P84085 180 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 SLC18A3Q16572 532 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 PARP15Q460N3 678 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 KIAA0895LQ68EN5 471 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 ZCCHC9Q8N567 271 aaKnown RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 PCDH20Q8N6Y1 951 aaKnown RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 TMIEQ8NEW7 156 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 OR2T34Q8NGX1 318 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 PIP4K2CQ8TBX8 421 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 BIRC7Q96CA5 298 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 SNRNP25Q9BV90 132 aaKnown RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 GTPBP2Q9BX10 602 aaKnown RBP16.05■□□□□ 0.16
CCDC78-216ENST00000544996 TNKS2Q9H2K2 1166 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 DYRK4Q9NR20 520 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 ANAPC7Q9UJX3 599 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms