RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TMEM110-MUSTN1A8MSY1 372 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 TBL1XO60907 577 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 ENDOD1O94919 500 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 F9P00740 461 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 APOEP02649 317 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
ACTN1-206ENST00000544964 ZNF883P0CG24 379 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 CCR1P32246 355 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 CXCR3P49682 368 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 HDAC4P56524 1084 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 RPS14P62263 151 aaKnown RBP12.82□□□□□ -0.36
ACTN1-206ENST00000544964 NUGGCQ68CJ6 796 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 SCYL2Q6P3W7 929 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 SND1Q7KZF4 910 aaKnown RBP eCLIP12.82□□□□□ -0.36
ACTN1-206ENST00000544964 STRADAQ7RTN6 431 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 CPNE8Q86YQ8 564 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 UNC45BQ8IWX7 931 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 ADAMTS14Q8WXS8 1223 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 RFFLQ8WZ73 363 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 ORAI3Q9BRQ5 295 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 LACRTQ9GZZ8 138 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 MTG2Q9H4K7 406 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 WDCPQ9H6R7 721 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 GAREM1Q9H706 876 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 FBRSQ9HAH7 460 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
ACTN1-206ENST00000544964 TOR4AQ9NXH8 423 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 IP6K2Q9UHH9 426 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 XPO7Q9UIA9 1087 aaKnown RBP12.82□□□□□ -0.36
ACTN1-206ENST00000544964 INTS6Q9UL03 887 aaKnown RBP12.82□□□□□ -0.36
ACTN1-206ENST00000544964 DUSP10Q9Y6W6 482 aa12.82□□□□□ -0.36
ACTN1-206ENST00000544964 SMG1Q96Q15 3661 aaKnown RBP12.81□□□□□ -0.36
ACTN1-206ENST00000544964 A0A1B0GVT2 93 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 KCNU1A8MYU2 1149 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 I6L893 689 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-206ENST00000544964 MYO1FO00160 1098 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 PJA2O43164 708 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 BUB1O43683 1085 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 ACSL4O60488 711 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 SEMA4FO95754 770 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 CER1O95813 267 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 DESP17661 470 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 NOP2P46087 812 aaKnown RBP12.81□□□□□ -0.36
ACTN1-206ENST00000544964 SLC11A2P49281 568 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 RPS24P62847 133 aaKnown RBP12.81□□□□□ -0.36
ACTN1-206ENST00000544964 MESDQ14696 234 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 HLA-BQ31612 363 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 LAYNQ6UX15 382 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 RHOT2Q8IXI1 618 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 ARFGAP1Q8N6T3 406 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 PNPLA1Q8N8W4 532 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 ATP6V0D2Q8N8Y2 350 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 SNX19Q92543 992 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 AZIN2Q96A70 460 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 TTC17Q96AE7 1141 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 MRGPRX3Q96LB0 322 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-206ENST00000544964 TKTL2Q9H0I9 626 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 TM7SF3Q9NS93 570 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 TRIM10Q9UDY6 481 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 SALL4Q9UJQ4 1053 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 PLA2G4CQ9UP65 541 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 BTBD3Q9Y2F9 522 aa12.81□□□□□ -0.36
ACTN1-206ENST00000544964 KNTC1P50748 2209 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 C10orf142B7Z368 130 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 TAF4O00268 1085 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 LRCH4O75427 683 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 PAGE1O75459 146 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 RNF8O76064 485 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 MTA2O94776 668 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 PROSCO94903 275 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 DKK1O94907 266 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 IGHV4-34P06331 123 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 SLC2A3P11169 496 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 TCF4P15884 667 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 GGCXP38435 758 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 CSKP41240 450 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 CSNK1EP49674 416 aaKnown RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 AFF3P51826 1226 aaKnown RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 ZBTB16Q05516 673 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 PIGHQ14442 188 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 TCEAL1Q15170 157 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 KIF19Q2TAC6 998 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 BRMS1LQ5PSV4 323 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 RAP1GAP2Q684P5 730 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 ZNF776Q68DI1 518 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 IL27RAQ6UWB1 636 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 DBX2Q6ZNG2 339 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 SLCO6A1Q86UG4 719 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 MFN1Q8IWA4 741 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 CCDC185Q8N715 623 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 HJURPQ8NCD3 748 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 FIBINQ8TAL6 211 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 BIRC7Q96CA5 298 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 MAGEB5Q9BZ81 275 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 SIK2Q9H0K1 926 aa12.8□□□□□ -0.36
ACTN1-206ENST00000544964 RSPH9Q9H1X1 276 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-206ENST00000544964 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms